Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30775
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 35 0.32
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 1.3
AJ292079-1|CAC44892.1| 67|Homo sapiens MUC5AC protein protein. 32 2.3
Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein. 30 6.9
X15218-1|CAA33288.1| 728|Homo sapiens protein ( Human ski oncog... 30 9.1
D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein. 30 9.1
BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.1
BC131491-1|AAI31492.1| 778|Homo sapiens MDC1 protein protein. 30 9.1
BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein. 30 9.1
AY334557-1|AAP97864.1| 168|Homo sapiens ski oncoprotein protein. 30 9.1
AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage... 30 9.1
AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage... 30 9.1
AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.1
AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.1
AL590822-8|CAI12482.1| 728|Homo sapiens v-ski sarcoma viral onc... 30 9.1
AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.1
AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein. 30 9.1
AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila... 30 9.1
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.32
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 531 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 695
P TT+ T T + P S T AP T + ++ TLAPT S T T T
Sbjct: 41 PVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTST 95
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 540 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
TT+ T T + P S TLAP T + + ++ T PT S T
Sbjct: 60 TTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTT 104
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 528 LPKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 695
+P +T + T T + P S T AP + + ++ TLAPT S T T T
Sbjct: 1090 IPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTST 1145
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 540 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 695
T+T + P+T ++ P S T P+T + S ++ T APT S T T T
Sbjct: 773 TSTTSTPQTS-TISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTST 823
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 540 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 668
TT+ T T + P S T P+T S + S+ T APT S
Sbjct: 669 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTS 711
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 540 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 668
TT+ T T + P S T P+T S + S+ T APT S
Sbjct: 804 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 846
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 540 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 695
TT+ T T + P S TLAP T + + ++ APT S +T T
Sbjct: 1110 TTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTSTNSAPTTSTISASTTST 1161
>AJ292079-1|CAC44892.1| 67|Homo sapiens MUC5AC protein protein.
Length = 67
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 540 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
TT+ T T + P S T P+T S + S+ T APT S T
Sbjct: 16 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTT 60
>Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein.
Length = 62
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 540 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 668
TT+ T T + P S T P+T S + S+ T APT S
Sbjct: 12 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 54
>X15218-1|CAA33288.1| 728|Homo sapiens protein ( Human ski oncogene
mRNA. ).
Length = 728
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 641
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480
>D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1345 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1393
>BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>BC131491-1|AAI31492.1| 778|Homo sapiens MDC1 protein protein.
Length = 778
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 33 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 81
>BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1345 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1393
>AY334557-1|AAP97864.1| 168|Homo sapiens ski oncoprotein protein.
Length = 168
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 641
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 120 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 157
>AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 734 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 782
>AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AL590822-8|CAI12482.1| 728|Homo sapiens v-ski sarcoma viral
oncogene homolog (avian) protein.
Length = 728
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 641
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480
>AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila
photoreceptor protein calphotin protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 674
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,473,764
Number of Sequences: 237096
Number of extensions: 1637402
Number of successful extensions: 9337
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9332
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -