Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30770
         (781 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FNN8 Cluster: Sodium/calcium exchanger protein; n=1; ...    34   3.5  
UniRef50_UPI00006A0E2B Cluster: UPI00006A0E2B related cluster; n...    34   4.6  
UniRef50_Q94295 Cluster: Serpentine receptor, class x protein 33...    33   8.0  

>UniRef50_A2FNN8 Cluster: Sodium/calcium exchanger protein; n=1;
           Trichomonas vaginalis G3|Rep: Sodium/calcium exchanger
           protein - Trichomonas vaginalis G3
          Length = 611

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -2

Query: 606 TLTVCQNIFFNTHIFFDIHRFLS*ITEFSKHRSGKSKTKTVVE--CLVFMLITCYVWSMF 433
           T +V   I +   +FF +H       +F + + G+   +T+    C+V +L++C ++S+ 
Sbjct: 414 TTSVLMPIVYGVGLFFSLHTHKYIYDQFEQEQKGEDSVETMSTWICVVVLLVSCVIFSI- 472

Query: 432 AAELYYDIRDLEIARM 385
             E+  D+    I +M
Sbjct: 473 VCEIVSDVMPPAIDKM 488


>UniRef50_UPI00006A0E2B Cluster: UPI00006A0E2B related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A0E2B UniRef100 entry -
           Xenopus tropicalis
          Length = 559

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 542 YHKLQNLVNIVAVKAKQKQLLNVSCSC*SHVTCGRCSQQNSTTT 411
           +HKLQ      A   K K+ ++ +C    H  CGRC + +  TT
Sbjct: 5   FHKLQEDTTCYACLRKSKKYISFACG---HTLCGRCRESHGATT 45


>UniRef50_Q94295 Cluster: Serpentine receptor, class x protein 33;
           n=1; Caenorhabditis elegans|Rep: Serpentine receptor,
           class x protein 33 - Caenorhabditis elegans
          Length = 294

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = -2

Query: 660 IILFSAGLK*LKEYWVKNTLTVCQNIFFNTHIFFDIHRFLS*ITEFS-KHRSGKSKTK-- 490
           +I+F++ L     +W    L VC  I  +TH    ++RF++    FS K+      TK  
Sbjct: 64  MIIFASQLMIYCSHWAGYVLIVCYEISIHTHFLSSVNRFIAVFFPFSYKNIFSPCATKIY 123

Query: 489 -TVVECLVFMLITCYVWSMFAAELYY 415
            T +    F ++T  ++  F   L Y
Sbjct: 124 ITAIAIFSFTMMTTVIFG-FGCRLEY 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,113,398
Number of Sequences: 1657284
Number of extensions: 11039704
Number of successful extensions: 22546
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22543
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)