Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30770
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.4  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 414 DIRDLEIARMSSSSIDANGFICQKQFGSL--FHYSL 313
           ++ DL++A  S SS+D N F    Q GSL  FH ++
Sbjct: 165 ELEDLDLAYNSISSLDFNIF---DQVGSLGMFHVNM 197


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 579 FNTHIFFDIHRFLS*ITEFSKHRSGKSKTKTVVECLV 469
           F THIFFD   F     E S H   +++    V+ LV
Sbjct: 611 FETHIFFD-DAF-----EISDHNDDETQVNRFVKLLV 641


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 579 FNTHIFFDIHRFLS*ITEFSKHRSGKSKTKTVVECLV 469
           F THIFFD   F     E S H   +++    V+ LV
Sbjct: 611 FETHIFFD-DAF-----EISDHNDDETQVNRFVKLLV 641


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 579 FNTHIFFDIHRFLS*ITEFSKHRSGKSKTKTVVECLV 469
           F THIFFD   F     E S H   +++    V+ LV
Sbjct: 611 FETHIFFD-DAF-----EISDHNDDETQVNRFVKLLV 641


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 579 FNTHIFFDIHRFLS*ITEFSKHRSGKSKTKTVVECLV 469
           F THIFFD   F     E S H   +++    V+ LV
Sbjct: 611 FETHIFFD-DAF-----EISDHNDDETQVNRFVKLLV 641


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 741 IVCTCSHRSDLN 706
           + C CSH++ LN
Sbjct: 298 VFCDCSHQASLN 309


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 741 IVCTCSHRSDLN 706
           + C CSH++ LN
Sbjct: 298 VFCDCSHQASLN 309


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 603 LTVCQNIFFNTHIFF 559
           L  C  IFFN H+ F
Sbjct: 181 LFCCAFIFFNMHLLF 195


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 741 IVCTCSHRSDLN 706
           + C CSH++ LN
Sbjct: 298 VFCDCSHQASLN 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,622
Number of Sequences: 336
Number of extensions: 3148
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)