Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30688
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0311 - 15635165-15635590,15635777-15638698 34 0.029
12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,116... 32 0.12
06_01_1133 + 9364842-9364850,9364929-9365048,9365157-9365476,936... 30 0.47
04_03_0631 - 18190195-18190686,18190866-18191066 29 0.81
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230... 29 1.1
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 28 1.9
11_08_0003 + 27492503-27492812,27492863-27493148,27495399-274956... 28 2.5
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 28 2.5
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 28 2.5
01_01_0078 + 587975-588179,588506-588606,589087-589167,589240-59... 28 2.5
12_02_0123 - 13930138-13932471 27 4.3
06_03_0267 + 18970578-18972464 27 4.3
04_04_1028 + 30230224-30231274,30231500-30231609,30232144-302321... 27 4.3
04_04_0965 - 29762388-29762564,29764272-29766361,29766567-297671... 27 4.3
02_01_0256 + 1680240-1680485,1680950-1681024,1681527-1681776,168... 27 4.3
11_01_0561 - 4418452-4418658,4420168-4420509 27 5.7
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 27 5.7
03_01_0269 + 2080338-2080508,2081086-2081335,2081432-2082648,208... 27 5.7
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 26 7.6
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 26 7.6
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572... 26 7.6
>08_02_0311 - 15635165-15635590,15635777-15638698
Length = 1115
Score = 34.3 bits (75), Expect = 0.029
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 18 CEGGFLRSKNGTCVSIDECHRELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEP 188
C+G +R++ G V ECH ++C + Y ++ C C+ Y+ D+P
Sbjct: 142 CDGSAMRNERGEDVDPCECHFKIC--RDCYLDAQKDGCICPGCKEHYKIGEYADDDP 196
>12_01_0151 -
1158834-1159703,1159917-1160092,1160144-1162097,
1162360-1162620,1162729-1162916,1164127-1164166
Length = 1162
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 306 CNLNTVHLLNKAGIHNLFHRHRCH 235
CNL +++L GIHNLF CH
Sbjct: 610 CNLQSINLAQIEGIHNLFSSFACH 633
>06_01_1133 +
9364842-9364850,9364929-9365048,9365157-9365476,
9366267-9366428,9367151-9367235,9367352-9367501,
9367588-9367635,9367705-9367773,9367897-9368600,
9369426-9369561,9369636-9369856,9370355-9370486,
9371316-9371406,9371878-9371925,9372004-9372132,
9372357-9372626
Length = 897
Score = 30.3 bits (65), Expect = 0.47
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +3
Query: 159 RSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVCRXEKC 335
+ Q C PC C + NGTC ++ ++C + C ++ CR +C
Sbjct: 641 KDQPCRQYTPCGCQSACGKQCPCLTNGTCCEKYCGCPKMCKNRFRGCHCAKSQCRSRQC 699
>04_03_0631 - 18190195-18190686,18190866-18191066
Length = 230
Score = 29.5 bits (63), Expect = 0.81
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 231 DNGTCVDERDCESQLCSVNE-QYLSC-IQAVCRXEKCSDLGGSL 356
DNG CVD++ C+ +L ++ Y C + C LG SL
Sbjct: 59 DNGKCVDQKGCDFKLLGYSDSDYAGCKVDRKSTTGTCQFLGRSL 102
>03_02_0752 -
10922456-10922644,10922719-10922796,10922888-10923016,
10923105-10923152,10923243-10923333,10923517-10923648,
10923869-10924086,10925121-10925271,10925360-10926009,
10926715-10926786,10926938-10926985,10927105-10927242,
10927750-10927756,10928064-10928212
Length = 699
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 186 PCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVCRXEKC 335
PC +C + +NGTC ++ S+ C + C ++ CR +C
Sbjct: 453 PCGCQQMCGKDCACVENGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQC 502
>01_05_0279 +
20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 174 PSDEPCEVGCVCKRGFRRADNGTCVDE 254
P D C CK F ADN TC +E
Sbjct: 854 PLDAHCSWQLFCKEAFWNADNKTCPEE 880
>11_08_0003 +
27492503-27492812,27492863-27493148,27495399-27495652,
27496645-27496830,27497042-27498117
Length = 703
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +3
Query: 12 CVCEGGF----LRSKNGTCVSIDECHRELCPVNEVYSSCRQPNCNSDKCE 149
C C G+ NG C+ IDECH L + +Y P N +C+
Sbjct: 264 CKCSEGYDGNPYLKGNGGCIDIDECH--LRTKSSIYGQL-YPCYNGSRCQ 310
>03_05_0176 +
21546952-21547887,21548856-21548921,21549959-21550877,
21551277-21551449,21551927-21552475
Length = 880
Score = 27.9 bits (59), Expect = 2.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 300 SCIQAVCRXEKCSDLGGS 353
SC++A CR +KCS G+
Sbjct: 191 SCLEATCRGDKCSSKAGT 208
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 9 GCVCEGGFLRSKNGTCVSIDECHRELCPVNEVYSSCRQPNCNSDKCEYK 155
GC C GF +C IDEC +L Y C+ +C + Y+
Sbjct: 567 GCKCPPGFKGDGIKSCEDIDECKEKL------YCQCKGCSCENTWGSYE 609
>01_01_0078 +
587975-588179,588506-588606,589087-589167,589240-590178,
590388-590542,590837-590902,590963-591023,591659-591853,
591939-592049,592116-592280
Length = 692
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 259 SLSSTQVPLSALRNPLLQTQPTSQGSSEG 173
+LSS LS L+ PLLQ T+QG S G
Sbjct: 239 TLSSGPQKLSELQPPLLQPPGTTQGPSSG 267
>12_02_0123 - 13930138-13932471
Length = 777
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 115 VDSPIVILINASTNTGHSRVPRTNP-AKSVVFVKEDFVGLTMAPVSM 252
V P+ ++ +A T GH P +P KS+VF D ++ P+SM
Sbjct: 631 VPVPVRVIHSAPTIAGHINHPVFSPDMKSIVFA-ADLAAVSADPISM 676
>06_03_0267 + 18970578-18972464
Length = 628
Score = 27.1 bits (57), Expect = 4.3
Identities = 11/41 (26%), Positives = 16/41 (39%)
Frame = +3
Query: 12 CVCEGGFLRSKNGTCVSIDECHRELCPVNEVYSSCRQPNCN 134
C+ GG R K+ C + C + C PNC+
Sbjct: 365 CIAHGGGRRCKHDGCTKGAQGSTNFCKAHGGGKRCTHPNCS 405
>04_04_1028 +
30230224-30231274,30231500-30231609,30232144-30232170,
30233107-30234252
Length = 777
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 108 SSCRQPNCNSDKCEYKYRSQSCPSDEPCEVG--CVCKRGFRRADNGTCVDERDCES 269
++C Q NS K +Y+ ++S D G C CK G+ + NG + C++
Sbjct: 297 ATCEQARNNSFKTQYRCNNESSCMDRFMGEGYVCRCKAGYDQ-HNGNPYEAGGCQA 351
>04_04_0965 - 29762388-29762564,29764272-29766361,29766567-29767170,
29768395-29768637,29768704-29770203
Length = 1537
Score = 27.1 bits (57), Expect = 4.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 133 ILINASTNTGHSRVPRTNPAKSVVFVKEDFVG 228
ILI S + H+ P T ++VV V EDF G
Sbjct: 919 ILIATSQHKVHAYDPATGSIETVVTVPEDFAG 950
>02_01_0256 +
1680240-1680485,1680950-1681024,1681527-1681776,
1681910-1681995,1682669-1682771,1683490-1683602,
1684259-1684351
Length = 321
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 226 LRNPLLQTQPTSQGSSEGHDCDLYLYSHLSE 134
L NP+L T+P +Q + GH L SH ++
Sbjct: 84 LLNPMLLTEPVNQRNVVGHASGAELASHATQ 114
>11_01_0561 - 4418452-4418658,4420168-4420509
Length = 182
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 153 CTRIYQNYNWAVDSSSTLRSRDIVPYGIH 67
C RI Q YNW D + + + D Y IH
Sbjct: 116 CPRIQQGYNWCRDLTKSWQQTD---YSIH 141
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 26.6 bits (56), Expect = 5.7
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 181 SEGHDCDLYLYSHLSELQLGCRQLEYTSFTGH 86
S D ++Y++SH ++ + C+Q + T + H
Sbjct: 505 SASEDSNVYVWSHENQYECACKQAKTTQTSEH 536
>03_01_0269 +
2080338-2080508,2081086-2081335,2081432-2082648,
2082933-2083083,2083247-2083563
Length = 701
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 226 LRNPLLQTQPTSQGSSEGHDCDLYLYSHLSELQLGCRQLEYTS 98
L+ LL ++ + S +G + LY L+ L GC Q+E T+
Sbjct: 344 LKELLLVSKICCENSVQGEEGTLYARRALTNLHGGCDQIEVTA 386
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 GCVCEGGFLRSKNGTCVSIDEC-HRELCPVNE 101
GC C GF C IDEC R C E
Sbjct: 499 GCKCPDGFKGDGVHKCEDIDECKERTACQCKE 530
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 GCVCEGGFLRSKNGTCVSIDEC-HRELCPVNE 101
GC C GF C IDEC R C E
Sbjct: 499 GCKCPDGFKGDGVHKCEDIDECKERTACQCKE 530
>07_03_1693 -
28756331-28756435,28756558-28756664,28757114-28757245,
28757412-28757478,28757553-28757635,28757824-28757905,
28763101-28763177,28763278-28763361,28763443-28763512,
28763625-28763713,28763801-28764487,28765700-28765997
Length = 626
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 9 GCVCEGGFLRSKNGTCVSIDECHRELCPVNEVYSSCRQPNCNSDKCEYK 155
GC C GF +C IDEC ++++ C+ +C + Y+
Sbjct: 496 GCKCPPGFKGDGIKSCEDIDECK------DKLFCQCKDCSCENTWGSYE 538
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,311,187
Number of Sequences: 37544
Number of extensions: 214103
Number of successful extensions: 688
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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