Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30688
(356 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32190.1 68414.m03959 expressed protein 32 0.13
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 30 0.39
At2g32490.1 68415.m03970 3'-5' exonuclease domain-containing pro... 30 0.39
At1g08280.1 68414.m00914 glycosyl transferase family 29 protein ... 30 0.39
At5g42620.1 68418.m05188 expressed protein 29 0.91
At5g59680.1 68418.m07482 leucine-rich repeat protein kinase, put... 29 1.2
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 29 1.2
At1g69360.1 68414.m07960 expressed protein 28 1.6
At2g32340.1 68415.m03953 TraB family protein contains Pfam domai... 28 2.1
At2g14570.1 68415.m01632 SWIM zinc finger family protein 27 2.8
At1g55180.1 68414.m06303 phospholipase D, putative (PLDEPSILON) ... 27 2.8
At1g06580.1 68414.m00697 pentatricopeptide (PPR) repeat-containi... 27 2.8
At2g01280.1 68415.m00042 transcription factor IIB (TFIIB) family... 27 3.7
At5g36260.1 68418.m04374 aspartyl protease family protein contai... 27 4.9
At5g35910.1 68418.m04312 3'-5' exonuclease domain-containing pro... 27 4.9
At5g11410.1 68418.m01331 protein kinase family protein contains ... 27 4.9
At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger) fa... 27 4.9
At1g68140.1 68414.m07783 expressed protein 27 4.9
At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger) fa... 26 6.4
At4g28380.1 68417.m04062 leucine-rich repeat family protein cont... 26 6.4
At4g14770.1 68417.m02272 tesmin/TSO1-like CXC domain-containing ... 26 6.4
At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger) fa... 26 8.5
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 26 8.5
At3g51050.1 68416.m05590 FG-GAP repeat-containing protein 26 8.5
At3g46330.1 68416.m05017 leucine-rich repeat protein kinase, put... 26 8.5
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 26 8.5
At2g28030.1 68415.m03397 aspartyl protease family protein contai... 26 8.5
At1g80010.1 68414.m09362 far-red impaired responsive protein, pu... 26 8.5
At1g29370.1 68414.m03591 kinase-related similar to putative prot... 26 8.5
At1g17230.1 68414.m02099 leucine-rich repeat family protein / pr... 26 8.5
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 72 CHRELCP-VNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCV 248
C + CP + +S C++P+C S C ++ SC C C C + + C
Sbjct: 328 CFKCSCPTLKGCFSCCKKPSCVSSCCCPTFKCSSCFGKPKCP-KCSCWKCLK------CP 380
Query: 249 DERDCESQLC 278
D C S C
Sbjct: 381 DTECCRSSCC 390
Score = 30.3 bits (65), Expect = 0.39
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 CVC---EGGFLRSKNGTCVSIDECHRELCPVNEVYSSCRQPNCNSDKCEYKYRSQSCPSD 182
C C +G F K +CVS C CP + S +P C C ++ CP
Sbjct: 331 CSCPTLKGCFSCCKKPSCVS--SC---CCPTFKCSSCFGKPKCPKCSC---WKCLKCPDT 382
Query: 183 EPCEVGCVCKRGF 221
E C C C F
Sbjct: 383 ECCRSSCCCSGCF 395
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 159 RSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVCRXEKC 335
++QSC PC +C + N TC ++ S+ C + C ++ CR +C
Sbjct: 601 KNQSCKQYTPCGCLSMCGKDCPCLTNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQC 659
>At2g32490.1 68415.m03970 3'-5' exonuclease domain-containing
protein contains Pfam profile PF01612: 3'-5' exonuclease
Length = 217
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 133 LQLGCRQLEYTSFTGHSSLWHSSIDTHVPFF 41
++ G + L + FTG+SSL H + HV FF
Sbjct: 1 MKRGIKHLCFNGFTGYSSLHHHYHEHHVDFF 31
>At1g08280.1 68414.m00914 glycosyl transferase family 29 protein /
sialyltransferase family protein contains Pfam profile:
PF00777 sialyltransferase (Glycosyltransferase family
29)
Length = 398
Score = 30.3 bits (65), Expect = 0.39
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 333 TSRXDKQLGCNLNTVHLLNKAGIHNLFHRHRCHCQPY 223
T R +K++G N + +N +H R C+C PY
Sbjct: 209 TERFEKKVGSKTN-ISFINSNILHQCGRRESCYCHPY 244
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 29.1 bits (62), Expect = 0.91
Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 20/133 (15%)
Frame = +3
Query: 12 CVCEGGFLRSKNGTCVSIDECHRELCPVNEVYSSCRQPN-------CNSDKCE------- 149
C GG +R I + ELC + V + PN C KC
Sbjct: 567 CPQAGGPIRFPGFNGELICPAYHELCSTSVVSVLGQCPNSCNFNGDCVDGKCRCLLGYHG 626
Query: 150 YKYRSQSCPSD----EPCEVG--CVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQ 311
+ R++SCP++ C C+C+ GF D T + C+ Q CS++ C
Sbjct: 627 HDCRNRSCPNNCNGHGKCTTQGVCICENGFTGIDCSTAI----CDEQ-CSLHGGV--CDN 679
Query: 312 AVCRXEKCSDLGG 350
VC +CSD G
Sbjct: 680 GVCEF-RCSDYAG 691
>At5g59680.1 68418.m07482 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 882
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 316 TAWMQLKYCSFTEQSWDSQSLSSTQVPLSALRNPLLQTQP-TSQGSSEGHDCDLYLYSHL 140
T W Q+ + T +S +V L+ P + P T++ SS D Y+Y+H
Sbjct: 224 TEWTQI---NTTSDVGNSNDYKPPKVALTTAAIPTNASAPLTNEWSSVNPDEQYYVYAHF 280
Query: 139 SELQ 128
SE+Q
Sbjct: 281 SEIQ 284
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/59 (23%), Positives = 23/59 (38%)
Frame = +3
Query: 159 RSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVCRXEKC 335
+ Q C PC C + NGTC ++ + C + C ++ CR +C
Sbjct: 645 KDQPCRQFNPCNCKIACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQC 703
Score = 27.1 bits (57), Expect = 3.7
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +3
Query: 114 CRQPN-CNSDKCEYKYRSQSCP---SDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCS 281
CRQ N CN C+ + CP + CE C C + + G + C S+ C
Sbjct: 649 CRQFNPCN---CKIAC-GKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCP 704
Query: 282 VNEQYLSCIQAVCRXEKCSDLGG 350
C VCR C +GG
Sbjct: 705 CFAADRECDPDVCR--NCWVIGG 725
>At1g69360.1 68414.m07960 expressed protein
Length = 896
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 274 SWDSQSLSSTQVPLSALRNPLL--QTQPTSQGSSE 176
SW+++S SS Q PL NP L TQ + S+E
Sbjct: 351 SWENRSSSSVQKPLPLQANPFLTFNTQVRADSSAE 385
>At2g32340.1 68415.m03953 TraB family protein contains Pfam domain
PF01963: TraB family
Length = 272
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = -2
Query: 196 TSQGSSEGHDCDLYLY--SHLSELQL-GCRQLE 107
T + ++EG CD+YL +H+S++ L CR++E
Sbjct: 85 TCESTAEGGSCDVYLVGTAHVSQVILESCREVE 117
>At2g14570.1 68415.m01632 SWIM zinc finger family protein
Length = 435
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 187 GSSEGHDCDLYLYSHLSELQLGCRQLEYTSFTGHSSLW 74
G E DC Y+ H+ CR+ E T + +LW
Sbjct: 383 GRCEVLDCGKYVSLHMGMKTCACRKWEMTGLSCRHALW 420
>At1g55180.1 68414.m06303 phospholipase D, putative (PLDEPSILON)
identical to SP|Q9C888 Phospholipase D epsilon (EC
3.1.4.4) (AtPLDepsilon) (PLD epsilon) (PLDalpha3)
{Arabidopsis thaliana}; similar to GI:6573119 from
[Lycopersicon esculentum] (Plant Physiol. 122 (1), 292
(2000))
Length = 762
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -2
Query: 355 RDPPRSEHFSX-RQTAWMQLKYCSFTEQSWDSQSLSSTQVPLSALRNPLLQTQPTSQGSS 179
R+P H S AW LK +F EQ W Q S V S +RN + T PT + +
Sbjct: 373 REPWHDCHVSVVGGAAWDVLK--NF-EQRWTKQCNPSVLVNTSGIRNLVNLTGPTEENNR 429
Query: 178 EGHDCDLYLYSHLSELQL 125
+ + L H+S ++
Sbjct: 430 KWNVQVLRSIDHISATEM 447
>At1g06580.1 68414.m00697 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 500
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 207 KHNRLRRVRPRDTTVTCICTRIYQNYNWAVDSSSTLRSRDIVPYGIHR*IRTFRFLI 37
KH + +RP T + TR++ + W V S+ + S D++ GI + TF LI
Sbjct: 208 KHMKKMGIRPDVVTYNSLITRLFHSGTWGV--SARILS-DMMRMGISPDVITFSALI 261
>At2g01280.1 68415.m00042 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 561
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -3
Query: 189 RVRPRDTTVTC-ICTRIYQNYNWAVD 115
++RP D + C +C RI +N+N++ D
Sbjct: 13 KIRPFDGGLACDLCGRILENFNFSTD 38
>At5g36260.1 68418.m04374 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 482
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 108 SSCRQPNCNSDKCEYKYRSQSCPSDEPC 191
S+ + C D C + +S++C + +PC
Sbjct: 131 STSKNVGCEDDFCSFIMQSETCGAKKPC 158
>At5g35910.1 68418.m04312 3'-5' exonuclease domain-containing
protein / helicase and RNase D C-terminal
domain-containing protein / HRDC domain-containing
protein low similarity to SP|Q01780
Polymyositis/scleroderma autoantigen 2 {Homo sapiens};
contains Pfam profiles PF00570: HRDC domain, PF01612:
3'-5' exonuclease
Length = 838
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 307 MQLKYCSFTEQSWDSQSLSSTQVPLSALRNPLLQTQPTSQGSSEG 173
+ L + SFTE+ DS+S S T + + T P S +G
Sbjct: 648 VNLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSSTMPASVSKEDG 692
>At5g11410.1 68418.m01331 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 336
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GCVCEGGFLRSKNGTCVSIDECHRE 83
GC+ E F S+ G VS+ EC+++
Sbjct: 69 GCINETTFAPSRTGITVSVMECYQD 93
>At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518
Length = 191
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 123 PNCNSDKCEYKYRSQSC 173
P C D+CEYK +SC
Sbjct: 101 PRCPHDQCEYKLTFRSC 117
>At1g68140.1 68414.m07783 expressed protein
Length = 334
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 153 KYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSV 284
++R+++ P P V + F D C+++RD E+ +CSV
Sbjct: 15 RFRARAKPYKFPSSKRLVARNMFAE-DCSKCLEKRDWENVICSV 57
>At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Frame = +3
Query: 36 RSKNGTCVSIDECHRELCPVN-EVYSSCRQPNCNSDKC-----EYKYRSQSCP 176
R+ G ID E C + E+ + P CN C ++ RSQSCP
Sbjct: 129 RTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCP 181
>At4g28380.1 68417.m04062 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to extensin-like
protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979
Length = 391
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 228 PYEILFYKHNRLRRVRPRDTTVTCICTRIYQNYNWA 121
P + +F +NRL + PRD T T ++ N +++
Sbjct: 186 PLDAIFVNNNRLTSLIPRDFTGTTASVVVFANNDFS 221
>At4g14770.1 68417.m02272 tesmin/TSO1-like CXC domain-containing
protein similar to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, CXC
domain protein TSO1 [Arabidopsis thaliana] GI:7767425;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain
Length = 658
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 111 SCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVD 251
+C++ NC CE C + CE CK F R D G+ +D
Sbjct: 448 NCKKSNCLKKYCECYQGGVGCSINCRCE---GCKNAFGRKD-GSSID 490
>At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 25.8 bits (54), Expect = 8.5
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Frame = +3
Query: 15 VCEGGFLRSKNGTCVSIDECHRELCPV-NEVYSSCRQPNCNSDKC-----EYKYRSQSCP 176
VC+ + + I+ E C + E+ S PNC C +++ RSQSCP
Sbjct: 120 VCKMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCP 179
Query: 177 SDEPCEVGCVCKRGFRRADNG 239
C+ +R D+G
Sbjct: 180 ---------FCRDSLKRVDSG 191
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 6 PGCVCEGGFLRSKNGT 53
PG +C+GG +KNGT
Sbjct: 65 PGFMCQGGDFTAKNGT 80
>At3g51050.1 68416.m05590 FG-GAP repeat-containing protein
Length = 698
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 109 EYTSFT----GHSSLWHSSIDTHVPFFDLKKPPSQTQPGS 2
E TS+T GH ++W + T + +L P T+ G+
Sbjct: 541 EVTSYTPDVHGHDAVWQWQLQTEATWSNLPSPSGLTESGT 580
>At3g46330.1 68416.m05017 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 878
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = -2
Query: 319 QTAWMQLKYCSFTEQSWDSQSLSSTQVPLSALRNPL-LQTQPTSQGSSEGHDCDLYLYSH 143
Q W Q+ S T + QV L P L T E D +YLY H
Sbjct: 224 QPEWNQI---STTSNVSNKNHYDPPQVALKMAATPTNLDAALTMVWRLENPDDQIYLYMH 280
Query: 142 LSELQL 125
SE+Q+
Sbjct: 281 FSEIQV 286
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 265 SQSLSSTQVPLSALRNPLLQTQPTSQGSSE 176
+Q+ S+ +P S + NP ++ +PT QG+S+
Sbjct: 1566 TQTESTNPLPCSVV-NPSVRNEPTEQGTSD 1594
>At2g28030.1 68415.m03397 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 392
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 54 CVSIDECHRELCPVNEVYSSC--RQPNCNSDKCEYK 155
C+ C+ + P+ + +S ++ CN + C YK
Sbjct: 89 CMPCTNCYSQYAPIFDPSNSSTFKEKRCNGNSCHYK 124
>At1g80010.1 68414.m09362 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
Length = 696
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = -3
Query: 240 CHCQPYEILFYKHNRLRRVRPRDTTVTCICTRIYQNYNWAVDSSSTLRSRDIVPYGIHR* 61
C+CQ +++L H+ RR R I R+ W VD + P H
Sbjct: 114 CNCQGFKLLKDAHS--RRKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSFDPQRAHNS 171
Query: 60 IRTFRFLISRSPLHKRSP 7
+ S SP K +P
Sbjct: 172 KSHKKSSSSASPATKTNP 189
>At1g29370.1 68414.m03591 kinase-related similar to putative protein
kinase (GI:11125348) [Homo sapiens]; similar to Paired
box protein Pax-8 (Swiss-Prot:P47240) [Canis familiaris]
Length = 831
Score = 25.8 bits (54), Expect = 8.5
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 253 SSTQVPLSALRNPLLQTQPTSQGSSEGHDCDL---YLYSHLSELQLGCRQLEYTSFTGHS 83
+ST V SA PL Q T+ G++ G+D L Y +HL LQ +Q ++ +S
Sbjct: 670 NSTNVG-SAGNFPLNQQSATT-GTTLGYDDVLSSQYKENHLLALQQQQQQQQHQQQNENS 727
Query: 82 SLWH 71
++WH
Sbjct: 728 AMWH 731
>At1g17230.1 68414.m02099 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1133
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -3
Query: 279 NKAGIHNLFHRHRCHCQPYEILFYKHNRLRRV-----RPRDTTVTCI 154
N AG H L + R HCQP ++ + ++L + R + T+TCI
Sbjct: 697 NFAGNHGLCNSQRSHCQP--LVPHSDSKLNWLINGSQRQKILTITCI 741
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,251,091
Number of Sequences: 28952
Number of extensions: 174988
Number of successful extensions: 658
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 459356736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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