Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30686
(780 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 31 0.016
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 31 0.016
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 31 0.016
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 29 0.037
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 29 0.037
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 29 0.064
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 29 0.064
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 4.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.6
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 22 7.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 7.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 7.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 7.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 7.4
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 21 9.7
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 30.7 bits (66), Expect = 0.016
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 466 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPPQ 290
P P+ +P G + PP+ WI PR R P P+P + P+ RPPQ
Sbjct: 117 PVPVPVPIYCGNF-----PPRPMGPWISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQ 171
Query: 289 RGTWLPS 269
+ P+
Sbjct: 172 NPRFGPT 178
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 30.7 bits (66), Expect = 0.016
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 466 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPPQ 290
P P+ +P G + PP+ WI PR R P P+P + P+ RPPQ
Sbjct: 117 PVPVPVPIYCGNF-----PPRPMGPWISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQ 171
Query: 289 RGTWLPS 269
+ P+
Sbjct: 172 NPRFGPT 178
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 30.7 bits (66), Expect = 0.016
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 466 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPPQ 290
P P+ +P G + PP+ WI PR R P P+P + P+ RPPQ
Sbjct: 355 PVPVPVPIYCGNF-----PPRPMGPWISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQ 409
Query: 289 RGTWLPS 269
+ P+
Sbjct: 410 NPRFGPT 416
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.037
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 466 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 293
P P+ +P G + PP+ WI PR R P P+P + P+ RPP
Sbjct: 123 PVPVPVPVYCGNF-----PPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 176
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.037
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 466 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 293
P P+ +P G + PP+ WI PR R P P+P + P+ RPP
Sbjct: 123 PVPVPVPVYCGNF-----PPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 176
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.064
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 412 PPQAQRFWIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 293
PP+ WI PR R P P+P + P+ RPP
Sbjct: 131 PPRPMGPWISVQEQVPRFRCIGPPTPFPRFIPPNAYRFRPP 171
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 28.7 bits (61), Expect = 0.064
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 412 PPQAQRFWIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 293
PP+ WI PR R P P+P + P+ RPP
Sbjct: 364 PPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 404
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 739 G*WCCQGTQTSKSLYNGSLFLE 674
G W G Q S +LYN F++
Sbjct: 170 GSWTFNGDQVSLALYNNKNFVD 191
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 409 PQAQRFWIRRTRHAPRRAPSQPQPWPAYEQP 317
PQ Q+ ++ + ++ Q Q WP E+P
Sbjct: 440 PQQQQQQQQQQQQQQQQQQQQQQHWPMEEEP 470
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.8 bits (44), Expect = 7.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 205 RKVLENRSLADEERMDALENQLKEARFLA 291
R+ R+ E++ ALEN+ K R+L+
Sbjct: 6 REARRARTAFTYEQLVALENKFKTTRYLS 34
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 7.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1
Query: 607 VAEKEKYKDIGRRSGYRLRKAHPQGISFRYTKTSKSECPGN 729
V EK+ Y I S +R H I+ T + CP N
Sbjct: 101 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMN 141
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 7.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1
Query: 607 VAEKEKYKDIGRRSGYRLRKAHPQGISFRYTKTSKSECPGN 729
V EK+ Y I S +R H I+ T + CP N
Sbjct: 101 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMN 141
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 7.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1
Query: 607 VAEKEKYKDIGRRSGYRLRKAHPQGISFRYTKTSKSECPGN 729
V EK+ Y I S +R H I+ T + CP N
Sbjct: 40 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMN 80
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = -3
Query: 412 PPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPPQR 287
P Q Q+ ++ + P Q QP P +Q + +P Q+
Sbjct: 1505 PQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQ 1546
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 21.4 bits (43), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 193 SERARKVLENRSLADEERMDALENQLKEARFLAEEADKK 309
SER EN L E+ ALE+ LK + E+ +++
Sbjct: 95 SERRNIFGENDELIAEKVAHALESGLKVIACIGEKLEER 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.310 0.126 0.319
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,386
Number of Sequences: 438
Number of extensions: 4399
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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