Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30685
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038233-1|AAH38233.1|  771|Homo sapiens pleckstrin and Sec7 dom...    31   5.0  
X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein.          30   6.6  
U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein.          30   6.6  

>BC038233-1|AAH38233.1|  771|Homo sapiens pleckstrin and Sec7 domain
           containing 2 protein.
          Length = 771

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 108 KTHLDMIGRNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTR 236
           KTH DM G+  TP  + R W+ F   LKG+     ++ YRP +
Sbjct: 522 KTHADMDGKR-TPRGR-RGWKKFYAVLKGTILYLQKDEYRPDK 562


>X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein.
          Length = 2767

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = +3

Query: 129 GRNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTRRSVFPELLSTYPYSKSIYDDPIAA 308
           G++ TP+K      S+  +  G+  +  +  Y   ++ VFP +LS YP   S+ D P+AA
Sbjct: 794 GQDLTPAKLLVKIMSYREAASGNFSLFIQSLYEAGQQDVFP-VLSQYP---SLQDVPLAA 849

Query: 309 AE 314
            E
Sbjct: 850 LE 851


>U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein.
          Length = 2768

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = +3

Query: 129 GRNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTRRSVFPELLSTYPYSKSIYDDPIAA 308
           G++ TP+K      S+  +  G+  +  +  Y   ++ VFP +LS YP   S+ D P+AA
Sbjct: 794 GQDLTPAKLLVKIMSYREAASGNFSLFIQSLYEAGQQDVFP-VLSQYP---SLQDVPLAA 849

Query: 309 AE 314
            E
Sbjct: 850 LE 851


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,565,217
Number of Sequences: 237096
Number of extensions: 1851604
Number of successful extensions: 8288
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8274
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)