Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30685
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical pr...    36   0.027
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    33   0.19 
Z75545-1|CAB61025.1|  665|Caenorhabditis elegans Hypothetical pr...    32   0.33 
AB000913-1|BAA21715.1|  665|Caenorhabditis elegans UNC-14 protein.     32   0.33 
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical pr...    31   1.00 
Z81560-7|CAB76737.2|  188|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AC024762-5|AAF59478.2|  335|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    28   5.3  
Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical
           protein ZK896.7 protein.
          Length = 380

 Score = 35.9 bits (79), Expect = 0.027
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +1

Query: 229 QHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLA 408
           +H    F  S  PT T S   TT+       R P T T     ++TAT      PTTT++
Sbjct: 136 EHKELEFVCSYDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVS 195

Query: 409 LSIITGQP 432
            +  T  P
Sbjct: 196 TTTTTTVP 203


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 250 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 402
           P+ C+PT +P +   ++++ ++    P T +C+   +   TP+ +   TTT
Sbjct: 268 PSQCQPTCSP-QCIQSVTVSIQTTAQPTTASCIPACQPACTPQCVQAVTTT 317


>Z75545-1|CAB61025.1|  665|Caenorhabditis elegans Hypothetical
           protein K10D3.2 protein.
          Length = 665

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +1

Query: 277 PSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI 417
           P+R +T    P R  R P + + +SI+ +T+TPR+   P+TT  + +
Sbjct: 567 PARLSTA---PSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRV 610


>AB000913-1|BAA21715.1|  665|Caenorhabditis elegans UNC-14 protein.
          Length = 665

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +1

Query: 277 PSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI 417
           P+R +T    P R  R P + + +SI+ +T+TPR+   P+TT  + +
Sbjct: 567 PARLSTA---PSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRV 610


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 250 PNSCRP-TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIIT 423
           PN  +P T + ++ TTT S   R     AT T L+      TP   ++PTT+LAL   T
Sbjct: 321 PNVTKPITRSTTKRTTTRSTTKRLTTTKAT-TVLTTTPVKVTPATTTLPTTSLALETTT 378


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 19/67 (28%), Positives = 26/67 (38%)
 Frame = +1

Query: 202 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 381
           T+ P   T +        +  PT T +  TTT + P      P T T      +TA    
Sbjct: 140 TTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTT 199

Query: 382 LSMPTTT 402
            + PTTT
Sbjct: 200 TTTPTTT 206



 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 265 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIIT 423
           PT T +  TTT + P      P T T      +T      + PTTT  +   T
Sbjct: 168 PTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTT 220



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 265 PTLTPSRFTTTLSLPLRGLRYPATVTCLSI--ARSTATPRALSMPTTTLALSIIT 423
           PT T +  TTT ++P      P T T  +     +T TP   + P TT + +  T
Sbjct: 203 PTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTT 257



 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 265 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 402
           PT T +  TTT + P      P T T      +T      + PTTT
Sbjct: 182 PTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTT 227



 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +1

Query: 265 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 402
           PT T +  TTT + P      P T T +    +T TP   +  TTT
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVP-TTTTTTPTTTTTTTTT 233


>Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical
           protein F56H9.6 protein.
          Length = 245

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +1

Query: 265 PTLTPSRFTTTLSLPLRGLRY-PATVTCLSIARSTATPRALSMPTTTLALSIITGQP 432
           PT T +  TTT + P       P T T  +   +T TP   +  TTT   +  T  P
Sbjct: 65  PTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATP 121


>Z81560-7|CAB76737.2|  188|Caenorhabditis elegans Hypothetical
           protein K02E2.8a protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/56 (32%), Positives = 21/56 (37%)
 Frame = +1

Query: 235 AAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 402
           AAA  P      L P   TTT ++       P T T      +T T      PTTT
Sbjct: 11  AAACIPTQFVTPLNPGTITTTTTISAPTTTVPITTTNPVSTTTTTTTTTTEAPTTT 66


>Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical
           protein C30H6.4 protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 250 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIIT 423
           P + +PT T    TTT ++P       +T T  S+  +T T  + + PTT+ +    T
Sbjct: 255 PETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVV-TTTTVTSTTEPTTSTSTPTTT 311


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 265 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIIT 423
           PT T S  T+T++ P       ++ T   +  +T TP   ++ TTT     +T
Sbjct: 244 PTTTVSYSTSTITTPQEDDSEYSSTTSADVISTTTTPSIDAIETTTTGFDAVT 296


>AC024762-5|AAF59478.2|  335|Caenorhabditis elegans Hypothetical
           protein Y38F2AL.1 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 8   RHSTSARPRHHTTLFNYDRYLTEYEHDIDRQNVQNTFRH 124
           R++T   P H    F+YD+Y   +E + D   V    RH
Sbjct: 117 RYATVTEPLHCVYKFDYDKYSGTFELEDDNSPVGEVNRH 155


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 268 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALS 414
           T T + FTTT+ L       P+T T  +   ST++    + PTTTL  S
Sbjct: 388 TTTSTTFTTTM-LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTS 435


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 268 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALS 414
           T T + FTTT+ L       P+T T  +   ST++    + PTTTL  S
Sbjct: 388 TTTSTTFTTTM-LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTS 435


>Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical
           protein F33E2.7 protein.
          Length = 174

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +1

Query: 259 CRPTLT-PSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 402
           C P+   PS  TTT + P      P T T      +T      + PTTT
Sbjct: 78  CDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,619,065
Number of Sequences: 27780
Number of extensions: 310462
Number of successful extensions: 966
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)