Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30685
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   0.88 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.88 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   4.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.7  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   6.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.2  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 29  PRHHTTLFNYDRYLTEYEHDID 94
           PRH + L N +  +T++E D+D
Sbjct: 175 PRHASDLDNCNHLMTKFEPDLD 196


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
 Frame = +1

Query: 247 FPNSCRPTLTPSRFTTTLSLPLR----GLRYPATVTCLSIARSTATPRALSMPTTT 402
           F +SC P   P       S PL         PAT+T  +   +T T  A +  TTT
Sbjct: 75  FSSSCDPV--PGNLEQIGSRPLHPPASSTSLPATITTTTTTTTTTTATAAATATTT 128


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 241 LRRVGLYLSSALMSSEPFRERT 176
           L++VG   +    + E FRERT
Sbjct: 67  LKKVGFVNADTTFNEEKFRERT 88


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 176 RAFSKRFGRHQSRGKVQANTPQRFSRTPVDLP 271
           +AF+++   + S GK+ A  P  FS      P
Sbjct: 337 KAFARKKTDYSSFGKILATEPTLFSNVTPKFP 368


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 319 LRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQP 432
           L+Y  T+  +   + T     + +P  TL  S  +G P
Sbjct: 339 LKYLPTILMMRRPKKTRLRWMMEIPNVTLPTSTYSGSP 376


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 479 KTES*FLSWTTPLNFSGW 426
           KT   +  +  P N+SGW
Sbjct: 191 KTSGKYKEYIIPANYSGW 208


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 479 KTES*FLSWTTPLNFSGW 426
           KT   +  +  P N+SGW
Sbjct: 191 KTSGKYKEYIIPANYSGW 208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,302
Number of Sequences: 438
Number of extensions: 4205
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)