Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30684
(448 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 266 4e-72
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 266 5e-72
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 266 5e-72
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 266 6e-72
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 266 6e-72
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 265 8e-72
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 265 8e-72
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 265 8e-72
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 265 8e-72
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 244 2e-65
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 195 1e-50
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 163 4e-41
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 138 2e-33
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 111 2e-25
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 3e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 103 4e-23
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 73 9e-14
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 70 8e-13
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 65 2e-11
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 33 0.12
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 31 0.27
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 31 0.35
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.4
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 3.3
At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transfera... 28 3.3
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 4.4
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 5.8
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 5.8
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 5.8
At3g32904.1 68416.m04164 hypothetical protein 27 5.8
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 5.8
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.6
At5g07730.1 68418.m00886 expressed protein 27 7.6
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 7.6
At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative / cel... 27 7.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 266 bits (653), Expect = 4e-72
Identities = 119/131 (90%), Positives = 126/131 (96%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFN+PAMY
Sbjct: 125 MFETFNTPAMY 135
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 266 bits (652), Expect = 5e-72
Identities = 119/131 (90%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFN+PAMY
Sbjct: 125 MFETFNTPAMY 135
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 266 bits (652), Expect = 5e-72
Identities = 119/131 (90%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFN+PAMY
Sbjct: 125 MFETFNTPAMY 135
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 266 bits (651), Expect = 6e-72
Identities = 118/131 (90%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFN+PAMY
Sbjct: 125 MFETFNAPAMY 135
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 266 bits (651), Expect = 6e-72
Identities = 118/131 (90%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFN+PAMY
Sbjct: 125 MFETFNAPAMY 135
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 265 bits (650), Expect = 8e-72
Identities = 119/131 (90%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFN PAMY
Sbjct: 125 MFETFNVPAMY 135
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 265 bits (650), Expect = 8e-72
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFNSPAMY
Sbjct: 125 MFETFNSPAMY 135
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 265 bits (650), Expect = 8e-72
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFNSPAMY
Sbjct: 125 MFETFNSPAMY 135
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 265 bits (650), Expect = 8e-72
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMY 446
MFETFNSPAMY
Sbjct: 125 MFETFNSPAMY 135
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 244 bits (597), Expect = 2e-65
Identities = 104/131 (79%), Positives = 122/131 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
GIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 414 MFETFNSPAMY 446
MFE+F P+MY
Sbjct: 126 MFESFAFPSMY 136
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 195 bits (475), Expect = 1e-50
Identities = 88/126 (69%), Positives = 102/126 (80%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 248
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 249 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 428
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 429 NSPAMY 446
+ PAMY
Sbjct: 119 DVPAMY 124
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 163 bits (397), Expect = 4e-41
Identities = 69/90 (76%), Positives = 83/90 (92%)
Frame = +3
Query: 177 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 356
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 357 LLTEAPLNPKANREKMTQIMFETFNSPAMY 446
LLTEAPLNPKA+REKMTQIMFETF P+MY
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMY 90
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 138 bits (333), Expect = 2e-33
Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 2/133 (1%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 227
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 228 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 407
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 408 QIMFETFNSPAMY 446
+ MFE +N ++
Sbjct: 122 ETMFEKYNFAGVF 134
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 111 bits (268), Expect = 2e-25
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 22/153 (14%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 203
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 204 -----------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE 347
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 348 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 446
HP+LL E PLN + REK ++MFE + PA++
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALF 157
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 3e-23
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 188
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 189 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 365
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 366 EAPLNPKANREK 401
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 103 bits (248), Expect = 4e-23
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 21/148 (14%)
Frame = +3
Query: 66 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 191
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 192 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 362
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 363 TEAPLNPKANREKMTQIMFETFNSPAMY 446
TE+PL P +RE +I+FETFN P +Y
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLY 152
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 72.9 bits (171), Expect = 9e-14
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 248
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 249 -----KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 410
+ P + ++ ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 411 IMFETFNSPAM 443
++FET+ PA+
Sbjct: 138 LLFETYGVPAV 148
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 69.7 bits (163), Expect = 8e-13
Identities = 38/126 (30%), Positives = 64/126 (50%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 248
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 249 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 428
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 429 NSPAMY 446
++Y
Sbjct: 122 GFSSLY 127
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 64.9 bits (151), Expect = 2e-11
Identities = 49/129 (37%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Frame = +3
Query: 66 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 242
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 243 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 419
TL PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 420 ETFNSPAMY 446
ETFN Y
Sbjct: 113 ETFNVSGFY 121
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 428 EGLKHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 294
E L+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 757 ESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 31.5 bits (68), Expect = 0.27
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 4 NTRRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVA 159
+T P H+ S A + +MAP PVSP T+ PAP S V+
Sbjct: 177 STTPPGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 31.1 bits (67), Expect = 0.35
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 428 EGLKHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 294
E L+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 757 ESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 407 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 300
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 213 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 392
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 393 REK 401
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 213 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 392
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 393 REK 401
REK
Sbjct: 225 REK 227
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 172 PWWRGRPTMDG--KTARGASSPAKPALHM 92
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 473
Score = 27.9 bits (59), Expect = 3.3
Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Frame = -3
Query: 368 FGEQHGVLLGGDTQLIVEGVVPDLLHVI-----PVGDDTVLDGVLQSEDTSLA-LGLVTH 207
FG Q VL T + G+ +H I PV D+ +L D +A GLV
Sbjct: 287 FGSQV-VLTKEQTLALASGLEKSGVHFIWAVKEPVEKDSTRGNILDGFDDRVAGRGLVIR 345
Query: 206 VGV-FLAHTDHHALVARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVVAHLELCV 30
+A H A+ A TH G VVAG L Y +++VV L++ V
Sbjct: 346 GWAPQVAVLRHRAVGAFLTHCGWNSVVEAVVAGVLMLTWPMRADQYTDASLVVDELKVGV 405
Query: 29 CLCWG 15
C G
Sbjct: 406 RACEG 410
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 76 STMAPACARPVSPATTRPAPSSRP 147
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 23 TNTHKVQDVRRRCCCA 70
+N HK+ D RRRC C+
Sbjct: 114 SNHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 23 TNTHKVQDVRRRCCCA 70
+N HK+ D RRRC C+
Sbjct: 114 SNHHKIPDSRRRCMCS 129
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.1 bits (57), Expect = 5.8
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
+D ALV +C FAGD A AV SI G G+ G K S+ D QS
Sbjct: 32 NDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSF-ADAGQSA 88
Query: 231 RGILTL 248
+ L
Sbjct: 89 KTFAVL 94
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 217 SSPT*ESFWPIPTITPWWRGRPTMDGKTARGASSPAKPALHMP 89
+SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 279 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 428
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 279 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 434
NW +E + + + P LL EA + PK+ E Q +++TF +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKN 545
>At5g07730.1 68418.m00886 expressed protein
Length = 264
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 232 LLLWASSPT*ESFWPIPTITPWWRGRPTMDGKTARG 125
LL W S T SF+P+ I WW R K +G
Sbjct: 187 LLTWFSK-TIRSFYPVLAIAIWWWMRVRAPRKRVKG 221
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 179
+D+ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol.
40, 323-332 (1999))
Length = 620
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 128 GRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 36
G +AGET A A A + ++RSN V + L L
Sbjct: 169 GSDLAGETAAAMAAASIVFRRSNPVYSRLLL 199
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,291,605
Number of Sequences: 28952
Number of extensions: 224184
Number of successful extensions: 817
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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