Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30683
(722 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D554D8 Cluster: PREDICTED: similar to CG4159-PA;... 73 5e-12
UniRef50_UPI00015B411C Cluster: PREDICTED: similar to pseudourid... 72 2e-11
UniRef50_Q9VDK6 Cluster: CG4159-PA; n=4; Diptera|Rep: CG4159-PA ... 71 2e-11
UniRef50_UPI0000DB712C Cluster: PREDICTED: similar to CG4159-PA;... 62 1e-08
UniRef50_Q54FA0 Cluster: TRNA pseudouridylate synthase; n=1; Dic... 48 3e-04
UniRef50_Q4T6B0 Cluster: Chromosome undetermined SCAF8839, whole... 47 4e-04
UniRef50_A7NVQ8 Cluster: Chromosome chr18 scaffold_1, whole geno... 47 4e-04
UniRef50_Q9XXN0 Cluster: Putative uncharacterized protein pus-1;... 47 4e-04
UniRef50_A2X849 Cluster: Putative uncharacterized protein; n=4; ... 46 7e-04
UniRef50_Q6CC39 Cluster: tRNA pseudouridine synthase 1; n=1; Yar... 46 7e-04
UniRef50_Q4P397 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A7RII9 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 45 0.002
UniRef50_A3F4X8 Cluster: TRNA pseudouridine synthase A; n=1; Tae... 45 0.002
UniRef50_Q9LN29 Cluster: F14O10.3 protein; n=3; Arabidopsis thal... 44 0.005
UniRef50_Q9Y606 Cluster: tRNA pseudouridine synthase A; n=29; Eu... 42 0.012
UniRef50_UPI00004993EF Cluster: tRNA pseudouridine synthase; n=1... 41 0.036
UniRef50_Q00ST8 Cluster: TRNA pseudouridylate synthase; n=2; Ost... 40 0.062
UniRef50_Q12211 Cluster: tRNA pseudouridine synthase 1; n=7; Sac... 40 0.062
UniRef50_A7TTG9 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_Q3KZ66 Cluster: Pseudouridylate synthase; n=3; Schistos... 39 0.14
UniRef50_Q7S319 Cluster: Putative uncharacterized protein NCU075... 38 0.25
UniRef50_Q6FJJ6 Cluster: Similar to sp|P53167 Saccharomyces cere... 38 0.25
UniRef50_Q1XD12 Cluster: TRNA pseudouridine synthase; n=1; Pneum... 38 0.33
UniRef50_Q0UN59 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_O94396 Cluster: tRNA pseudouridine synthase 1; n=1; Sch... 36 1.0
UniRef50_Q5K777 Cluster: Pseudouridylate synthase, putative; n=2... 36 1.3
UniRef50_Q0U5E9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A4RAI8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_P53167 Cluster: tRNA pseudouridine synthase 2; n=2; Sac... 36 1.3
UniRef50_Q6MEL6 Cluster: Putative ABC transporter permease ytgD;... 35 1.8
UniRef50_Q4D3D3 Cluster: Putative uncharacterized protein; n=3; ... 35 1.8
UniRef50_Q2H827 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q8AAK7 Cluster: Sialic acid-specific 9-O-acetylesterase... 35 2.3
UniRef50_Q7N6N2 Cluster: Complete genome; segment 6/17; n=1; Pho... 35 2.3
UniRef50_A0DJ25 Cluster: Pseudouridylate synthase; n=1; Parameci... 35 2.3
UniRef50_A2QZ58 Cluster: Putative frameshift; n=1; Aspergillus n... 35 2.3
UniRef50_Q5NG36 Cluster: tRNA pseudouridine synthase A; n=11; Fr... 35 2.3
UniRef50_A7NY39 Cluster: Chromosome chr6 scaffold_3, whole genom... 34 3.1
UniRef50_Q4UIU5 Cluster: Pseudouridylate synthase; n=2; Theileri... 34 3.1
UniRef50_A2QIQ0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_O23271 Cluster: Putative uncharacterized protein dl3100... 34 4.1
UniRef50_O22928 Cluster: Putative tRNA pseudouridine synthase; n... 34 4.1
UniRef50_A0B7V0 Cluster: Pseudouridylate synthase; n=1; Methanos... 33 5.4
UniRef50_Q1NSM9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A6RCJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A5E087 Cluster: Protein POS5; n=2; Saccharomycetales|Re... 33 7.1
UniRef50_Q65UU6 Cluster: RfbX protein; n=2; Pasteurellaceae|Rep:... 33 9.4
UniRef50_Q9TAH8 Cluster: ATP synthase A chain; n=1; Cafeteria ro... 33 9.4
UniRef50_Q5CPW7 Cluster: Pus1p-like type II pseudousynthas TruA;... 33 9.4
>UniRef50_UPI0000D554D8 Cluster: PREDICTED: similar to CG4159-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG4159-PA - Tribolium castaneum
Length = 588
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +3
Query: 336 ETKPPGEIKKPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQE 515
ET+ GE+ E+IKR+K A+LLGYSG YYGMQRNP TI YI++E
Sbjct: 241 ETEVTGEL---IEKIKRRKFAVLLGYSGTNYYGMQRNPNTPTIEEEFFKALYKNNYISEE 297
Query: 516 DFENAQNAQFQRSSRD*QG 572
+F Q QFQR++R +G
Sbjct: 298 NFTQVQTMQFQRAARTDKG 316
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/42 (50%), Positives = 34/42 (80%)
Frame = +2
Query: 596 VSLKLPLEVNVEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
VSLKL ++++ +IN++LPE I+VF ++RVT FNSK +C++
Sbjct: 324 VSLKLREDIDISKINEQLPEVIRVFGIRRVTKGFNSKVQCDS 365
>UniRef50_UPI00015B411C Cluster: PREDICTED: similar to
pseudouridylate synthase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to pseudouridylate synthase - Nasonia
vitripennis
Length = 437
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/70 (50%), Positives = 41/70 (58%)
Frame = +3
Query: 363 KPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQ 542
+P+ RIKRK AM+LGY G YYGMQRNPG TI IT E FE QN
Sbjct: 64 QPFIRIKRKNYAMMLGYCGKNYYGMQRNPGFNTIEEELIKAMLKADLITSEAFETIQNIN 123
Query: 543 FQRSSRD*QG 572
FQR++R +G
Sbjct: 124 FQRAARTDKG 133
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = +2
Query: 584 LNKFVSLKLPLEVNVEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
+ + VSLKLP + + + IN+ LPE I+VFA+KRVT FNSKS+C+A
Sbjct: 137 VRQVVSLKLPEDPSKDSINETLPEDIRVFAIKRVTKGFNSKSQCDA 182
>UniRef50_Q9VDK6 Cluster: CG4159-PA; n=4; Diptera|Rep: CG4159-PA -
Drosophila melanogaster (Fruit fly)
Length = 410
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = +3
Query: 366 PYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQF 545
P +RIKRKK A+LL Y G YYGMQRNPG+QTI +IT++ FE Q + F
Sbjct: 63 PADRIKRKKSAILLSYCGANYYGMQRNPGMQTIEEELFKAMLKHKWITEDSFEQIQISCF 122
Query: 546 QRSSRD*QG 572
QR++R +G
Sbjct: 123 QRAARTDKG 131
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +2
Query: 599 SLKLPLEVNVEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
S+KLP E+++E N LP+ I++F V+RVT FN+K +CNA
Sbjct: 140 SVKLPEELDLEAFNADLPQQIRLFGVERVTKGFNAKDQCNA 180
>UniRef50_UPI0000DB712C Cluster: PREDICTED: similar to CG4159-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG4159-PA
- Apis mellifera
Length = 366
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +2
Query: 584 LNKFVSLKLPLEVNVEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
+ + VSL+LP VN E+INK LP+ IKVF +KRVT FNSK+KC+A
Sbjct: 112 VRQIVSLQLPNHVNKEDINKHLPKDIKVFDIKRVTRNFNSKNKCDA 157
Score = 59.7 bits (138), Expect = 7e-08
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Frame = +3
Query: 258 EENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKMAMLLGYSGVEYYGM 437
E NK I+ V + R + P +I + IK+KK M+LGY G Y GM
Sbjct: 4 ETNKQIEDVVEETNKRQIIDESSEIVAKAPKLDIIEKKNNIKKKKFVMVLGYLGKNYSGM 63
Query: 438 QRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSRD*QG--CVRC*TSLSHLNY 611
Q N G++TI +IT+ +FE+ + +FQR++R +G VR SL N+
Sbjct: 64 QINRGIKTIEGSLLSALLKADFITKNEFEDLKEIKFQRAARTDKGVSAVRQIVSLQLPNH 123
Query: 612 L*KSMLKK 635
+ K + K
Sbjct: 124 VNKEDINK 131
>UniRef50_Q54FA0 Cluster: TRNA pseudouridylate synthase; n=1;
Dictyostelium discoideum AX4|Rep: TRNA pseudouridylate
synthase - Dictyostelium discoideum AX4
Length = 596
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Frame = +3
Query: 234 EAADVTKDEENKSIDIVPNKLLTRYNKRRAHRDWETKPP-----------GEIKKPYERI 380
EA + D+ K + T NKR+ ++ +PP + K +
Sbjct: 78 EADEDELDKFEKESESTSTTTTTTENKRKPNQPPPVRPPKLSKEELIELQNKTKITTDES 137
Query: 381 KRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSR 560
++KK+A++LGYSG Y GMQ+NPG++T+ I+ ++ Q + R +R
Sbjct: 138 RKKKVAIILGYSGTNYAGMQKNPGLKTVEEELEHALFRTGGISPDNMYYQQKVDWIRCAR 197
Query: 561 D*QG 572
+G
Sbjct: 198 TDKG 201
>UniRef50_Q4T6B0 Cluster: Chromosome undetermined SCAF8839, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8839,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 375
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 375 RIKRKKMAMLLGYSGVEYYGMQRNPG---VQTIXXXXXXXXXXXXYITQEDFENAQNAQF 545
R +KK+A+LL YSG YYGMQRNPG +TI I + E+ + F
Sbjct: 71 RYPKKKVALLLAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPENHAEDMKKMSF 130
Query: 546 QRSSRD*QG 572
QR +R +G
Sbjct: 131 QRCARTDKG 139
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 596 VSLKLPLEVNV-EEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
VSLKL L ++ E+IN+ LP I+V VKRVT FNSK+ C+A
Sbjct: 147 VSLKLWLIDDLAEKINQHLPPQIRVLGVKRVTQGFNSKNNCDA 189
>UniRef50_A7NVQ8 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 378
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 360 KKPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNA 539
KKP R KR+K+A+ Y GV Y GMQ+NPG +TI + ++D + +
Sbjct: 32 KKP--RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRF 89
Query: 540 QFQRSSRD*QG 572
+ RS+R +G
Sbjct: 90 DWARSARTDKG 100
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 626 VEEINKRLPETIKVFAVKRVTNRFNSKSKCN 718
VE +N LP I++F KRVT FN+K C+
Sbjct: 120 VERLNSNLPPQIRIFGFKRVTASFNAKKFCD 150
>UniRef50_Q9XXN0 Cluster: Putative uncharacterized protein pus-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein pus-1 - Caenorhabditis elegans
Length = 415
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/69 (40%), Positives = 36/69 (52%)
Frame = +3
Query: 354 EIKKPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQ 533
E KKP R+K+ K AMLLGY G +YYGMQ + TI +IT E
Sbjct: 24 EPKKP--RVKQAKYAMLLGYQGKKYYGMQLQKDLPTIESKLLEAMETAGWITTAQKEKPF 81
Query: 534 NAQFQRSSR 560
+ FQR++R
Sbjct: 82 DFFFQRAAR 90
>UniRef50_A2X849 Cluster: Putative uncharacterized protein; n=4;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 588
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 375 RIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRS 554
R KR+K+A+LLGY G Y GMQ+NPG +TI + + D + + R+
Sbjct: 45 RYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARA 104
Query: 555 SRD*QG 572
+R +G
Sbjct: 105 ARTDKG 110
>UniRef50_Q6CC39 Cluster: tRNA pseudouridine synthase 1; n=1;
Yarrowia lipolytica|Rep: tRNA pseudouridine synthase 1 -
Yarrowia lipolytica (Candida lipolytica)
Length = 528
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +3
Query: 312 KRRAHRDWETKPPGEIKKPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXX 491
K+ RD K G + R ++K+A ++GY G Y+GMQ NP +TI
Sbjct: 60 KQGEGRDTRRKTDGPLVADEVRQPKRKVACMIGYCGTGYHGMQLNPPQKTIEGDIFQAFV 119
Query: 492 XXXYITQEDFENAQNAQFQRSSRD*QG 572
I+Q + ++ + + F R++R +G
Sbjct: 120 KAGAISQNNADDPKKSAFMRAARTDKG 146
>UniRef50_Q4P397 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 615
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 303 RYNKRRAHRDWETKPPG--EIKKPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXX 476
R ++R R + + P E +R+ ++K+A+ GY G+ Y G+Q NPGV+TI
Sbjct: 91 RRDRRGTGRAQDNESPSTCEASASTDRLPKRKVAVKFGYCGIGYSGLQINPGVKTIEGDI 150
Query: 477 XXXXXXXXYITQEDFENAQNAQFQRSSRD*QG 572
++ ++ N QR++R +G
Sbjct: 151 FDAFCTAGAVSSDNAVNPNKVGLQRAARTDRG 182
>UniRef50_A7RII9 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 300
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 384 RKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSRD 563
+KK A+L+ Y GV Y GMQ NPGV+TI IT + E FQR +R
Sbjct: 1 KKKCALLISYCGVGYAGMQINPGVRTIEEQLINALHQAEVITDDAKECLGKMSFQRCART 60
Query: 564 *QG 572
+G
Sbjct: 61 DKG 63
>UniRef50_A3F4X8 Cluster: TRNA pseudouridine synthase A; n=1; Taenia
asiatica|Rep: TRNA pseudouridine synthase A - Taenia
asiatica (Asian tapeworm)
Length = 123
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +3
Query: 387 KKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSR 560
+K A+L+ YSGV + GMQRN G +TI YI +E +N FQR+S+
Sbjct: 57 RKCAILVVYSGVGFCGMQRNEGFRTIEGELMMALCNAGYILEEHMKNPSMICFQRASK 114
>UniRef50_Q9LN29 Cluster: F14O10.3 protein; n=3; Arabidopsis
thaliana|Rep: F14O10.3 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 549
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 375 RIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRS 554
+ +R+K+A++ + GV Y GMQ+NPG +TI + D +N ++ RS
Sbjct: 54 KYRRRKVAIVFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPDADRNKPRNYEWARS 113
Query: 555 SRD*QG 572
+R +G
Sbjct: 114 ARTDKG 119
Score = 36.3 bits (80), Expect = 0.77
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 626 VEEINKRLPETIKVFAVKRVTNRFNSKSKCN 718
VE +N +LP+ I+VF KRV F+SK C+
Sbjct: 139 VERLNSKLPDQIRVFGYKRVAPSFSSKKFCD 169
>UniRef50_Q9Y606 Cluster: tRNA pseudouridine synthase A; n=29;
Euteleostomi|Rep: tRNA pseudouridine synthase A - Homo
sapiens (Human)
Length = 427
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 596 VSLKLPLEVNV-EEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
VSLK+ L ++ E+IN LP I++ +KRVT FNSK++C+A
Sbjct: 156 VSLKVWLIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDA 198
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPG---VQTIXXXXXXXXXXXXYITQEDFENAQNAQ 542
E+ ++K+ +L+ YSG Y+GMQRN G +TI I + E+ +
Sbjct: 79 EKPPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMS 138
Query: 543 FQRSSRD*QG 572
FQR +R +G
Sbjct: 139 FQRCARTDKG 148
>UniRef50_UPI00004993EF Cluster: tRNA pseudouridine synthase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: tRNA pseudouridine
synthase - Entamoeba histolytica HM-1:IMSS
Length = 401
Score = 40.7 bits (91), Expect = 0.036
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +2
Query: 587 NKFVSLKLPLEVN-VEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
N +SLK+ L+ N +E IN LPETI++ V +V++ FN+K++ ++
Sbjct: 108 NNLISLKMGLDGNYIERINSFLPETIRIQDVVKVSHSFNAKTRVDS 153
>UniRef50_Q00ST8 Cluster: TRNA pseudouridylate synthase; n=2;
Ostreococcus|Rep: TRNA pseudouridylate synthase -
Ostreococcus tauri
Length = 450
Score = 39.9 bits (89), Expect = 0.062
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 381 KRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSR 560
K++K A+ Y G Y GMQRNPGV+TI I+ + + Q+ R++R
Sbjct: 40 KKRKCALTFAYVGAGYAGMQRNPGVRTIEGELEGAIARAGGISDANAGDFAKVQWTRAAR 99
Query: 561 D*QG 572
+G
Sbjct: 100 TDKG 103
>UniRef50_Q12211 Cluster: tRNA pseudouridine synthase 1; n=7;
Saccharomycetales|Rep: tRNA pseudouridine synthase 1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 544
Score = 39.9 bits (89), Expect = 0.062
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +3
Query: 375 RIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRS 554
R+ ++K+A+++GY G Y+GMQ NP TI I++++ + + F R+
Sbjct: 71 RLPKRKVAVMVGYCGTGYHGMQYNPPNPTIESALFKAFVEAGAISKDNSNDLKKNGFMRA 130
Query: 555 SRD*QG 572
+R +G
Sbjct: 131 ARTDKG 136
>UniRef50_A7TTG9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 562
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQR 551
+R+ ++K+A+++GY G Y+GMQ NP TI I++ + + + F R
Sbjct: 72 KRLPKRKVAVMVGYCGTGYHGMQYNPPNPTIEDALFKAFVQAGAISKANSNDLKKNGFMR 131
Query: 552 SSRD*QG 572
++R +G
Sbjct: 132 AARTDKG 138
>UniRef50_Q3KZ66 Cluster: Pseudouridylate synthase; n=3; Schistosoma
japonicum|Rep: Pseudouridylate synthase - Schistosoma
japonicum (Blood fluke)
Length = 334
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 381 KRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSR 560
KR+ A+L+ YSG YYGMQR P TI + E + FQR+S+
Sbjct: 45 KRRNNAILMMYSGWGYYGMQRGPIYPTIEGELSKALFTCGQLVNVTSEEHKKVNFQRASK 104
>UniRef50_Q7S319 Cluster: Putative uncharacterized protein
NCU07528.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU07528.1 - Neurospora crassa
Length = 625
Score = 37.9 bits (84), Expect = 0.25
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +2
Query: 596 VSLKLPLEVN--VEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
+SLKL +E V++IN LP+ IKV+ ++RVTN F+ C++
Sbjct: 190 LSLKLIVEDEDIVDKINSHLPDQIKVWGIQRVTNGFSCYQACDS 233
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQR 551
ER ++K+A+L+GY+G Y+G+Q N +TI I++ + ++ + + R
Sbjct: 116 ERRPKRKVAVLIGYAGTGYHGIQINHKEKTIEGDLFAAFVKAGAISKANADDPKKSSLVR 175
Query: 552 SSRD*QG 572
+R +G
Sbjct: 176 CARTDKG 182
>UniRef50_Q6FJJ6 Cluster: Similar to sp|P53167 Saccharomyces
cerevisiae YGL063w PUS2 pseudouridine synthase 2; n=1;
Candida glabrata|Rep: Similar to sp|P53167 Saccharomyces
cerevisiae YGL063w PUS2 pseudouridine synthase 2 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 317
Score = 37.9 bits (84), Expect = 0.25
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 393 MAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSRD*QG 572
MA++LGY G Y G+Q NP TI I+Q + ++ + F R++R +G
Sbjct: 1 MALVLGYLGTGYQGIQYNPPAHTIDNELFKALVATNCISQSNSDDFSKSSFSRATRTDKG 60
>UniRef50_Q1XD12 Cluster: TRNA pseudouridine synthase; n=1;
Pneumocystis carinii|Rep: TRNA pseudouridine synthase -
Pneumocystis carinii
Length = 227
Score = 37.5 bits (83), Expect = 0.33
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 596 VSLKLPLEVN--VEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
+SLKL +E +E IN+ LPETI+V+ + R FN ++ C A
Sbjct: 51 LSLKLIIEQPNLLERINEALPETIRVWGISRTLKSFNPRTFCEA 94
>UniRef50_Q0UN59 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 498
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 353 RNQKTIRKD*EKKNGYAAGVLRS*IL---RYA--TKSWCTNNRRRIIKSIVG 493
R+ T R + EK+NGY + S +L YA KSWC N +I+ S+ G
Sbjct: 168 RSADTRRDEAEKRNGYITRPMNSFMLYRSAYAERAKSWCAQNNHQIVSSVAG 219
>UniRef50_O94396 Cluster: tRNA pseudouridine synthase 1; n=1;
Schizosaccharomyces pombe|Rep: tRNA pseudouridine
synthase 1 - Schizosaccharomyces pombe (Fission yeast)
Length = 534
Score = 35.9 bits (79), Expect = 1.0
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQR 551
E+ ++K+A L+GY G Y+GMQ NP +TI ++ + ++ + R
Sbjct: 39 EKKPKRKVACLVGYCGSGYHGMQLNPPSKTIEGDLFDAFVKAGAVSSYNADDPKKVALAR 98
Query: 552 SSRD*QG 572
++R +G
Sbjct: 99 AARTDKG 105
>UniRef50_Q5K777 Cluster: Pseudouridylate synthase, putative; n=2;
Filobasidiella neoformans|Rep: Pseudouridylate synthase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 560
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 318 RAHRDWETKPPGEIKKPYERIKRKKMAMLLGYSGVEYYGMQ 440
RA R WE P E +R+ +++ A+L+GY G Y GMQ
Sbjct: 103 RAQRAWE---PSEKTNGEKRLPKRRCAVLIGYCGTGYQGMQ 140
>UniRef50_Q0U5E9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 621
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 348 PGEIKKPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFEN 527
P E + ER ++K+A+++GYSG Y GMQ + +TI I++ + ++
Sbjct: 92 PAEEVEAEERRPKRKVAVMIGYSGTGYKGMQIDNKQKTIEGDLFTAFVAAGAISKANADD 151
Query: 528 AQNAQFQRSSRD*QG 572
+ + R +R +G
Sbjct: 152 PKKSSLVRCARTDKG 166
>UniRef50_A4RAI8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 720
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQR 551
ER +KK+A+L+GY+G Y GMQ N +TI I++ + + + R
Sbjct: 107 ERKPKKKVAVLIGYAGTGYKGMQINHFEKTIEGDLFRAFVDAGAISKANASDPKKVSLMR 166
Query: 552 SSRD*QG 572
+R +G
Sbjct: 167 CARTDKG 173
>UniRef50_P53167 Cluster: tRNA pseudouridine synthase 2; n=2;
Saccharomyces cerevisiae|Rep: tRNA pseudouridine
synthase 2 - Saccharomyces cerevisiae (Baker's yeast)
Length = 370
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 581 LLNKFVSLKLPL-EVNVEEINKRLPETIKVFAVKRVTNRFNSKSKCNA 721
+LN +SLK+ L E V ++N LP I+V+ ++ V +FN++S C++
Sbjct: 62 MLN-LLSLKITLREDTVAKLNAALPPEIRVWGIQPVNKKFNARSACDS 108
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 399 MLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSRD*QG 572
MLLGY G YYGMQ NP +TI I++E+ + F ++R +G
Sbjct: 1 MLLGYCGSGYYGMQYNPPHKTIEGEILTKLFDVGAISEENSLAPKKNSFMAAARTDKG 58
>UniRef50_Q6MEL6 Cluster: Putative ABC transporter permease ytgD;
n=1; Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ABC transporter permease ytgD - Protochlamydia
amoebophila (strain UWE25)
Length = 336
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = -2
Query: 379 ILSYGFLISPGGLVSQSRCARRLLYLVNSLFGTISIDLFSSSFVTSAASITDSKRALVMA 200
IL + + L+ RR+ L NSL TI I + + F +SAAS + + A
Sbjct: 47 ILVLSGVAASSALIGTFLVLRRMTMLANSLSHTILIGIVLAYFFSSAASTSGHGLITMQA 106
Query: 199 KIFFSVLTGCLGKVL--FKLLTNNLINDTDI 113
+ S++TG L L F + T L D +
Sbjct: 107 MLIASLVTGFLTAFLTEFLIKTGGLQEDASV 137
>UniRef50_Q4D3D3 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 634
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 375 RIKRKKMAMLLGYSGVEYYGMQRN--PGVQTIXXXXXXXXXXXXYITQEDFEN---AQNA 539
++ ++K+A++ GY G Y G+Q N PG T+ I++E++E Q
Sbjct: 96 KLPKRKVAIIFGYVGERYCGLQWNHLPGYPTVEEELLRALHRTGMISKENYEQEKVQQKL 155
Query: 540 QFQRSSRD*QG 572
++R+SR +G
Sbjct: 156 NWERASRTDKG 166
>UniRef50_Q2H827 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 584
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQR 551
ER ++K+A+L+GY+G Y+G+Q N +TI I++ + ++ + + R
Sbjct: 103 ERRPKRKVAVLIGYAGTGYHGIQINHKEKTIEGDLFSAFVAAGAISKANADDPKKSSLVR 162
Query: 552 SSRD*QG 572
+R +G
Sbjct: 163 CARTDKG 169
>UniRef50_Q8AAK7 Cluster: Sialic acid-specific 9-O-acetylesterase;
n=5; Bacteroidales|Rep: Sialic acid-specific
9-O-acetylesterase - Bacteroides thetaiotaomicron
Length = 692
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -2
Query: 268 LFSSSFVTSAASITDSKRALVMAKIFFSVLTGCLGKVLFKLL-TNNLINDTDIPKTL 101
L+ F+ + A D + A +MA+ +S +TG G + LL T+N++ D+P T+
Sbjct: 186 LYPYPFILTDAVHPDPEGAFIMAQTVYSAITGDYGGLKMSLLYTDNMVLQRDVPLTV 242
>UniRef50_Q7N6N2 Cluster: Complete genome; segment 6/17; n=1;
Photorhabdus luminescens subsp. laumondii|Rep: Complete
genome; segment 6/17 - Photorhabdus luminescens subsp.
laumondii
Length = 381
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -2
Query: 232 ITDSKRALVMAKIFFSVLTGCLGKVLFKLLTNNLINDTDIPKTL 101
I DSK +A+IF S+ LG V + L +N +ND D K L
Sbjct: 70 IADSKYLFYIAEIFNSISLTILGGVFYSYLIDNSLNDNDTHKIL 113
>UniRef50_A0DJ25 Cluster: Pseudouridylate synthase; n=1; Paramecium
tetraurelia|Rep: Pseudouridylate synthase - Paramecium
tetraurelia
Length = 297
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 587 NKFVSL-KLPLEVNVEEINKRLPETIKVFAVKRVTNRFNSKSKCN 718
NK V + ++ ++E+N +LP IKV A+K VT FN K + +
Sbjct: 73 NKLVDKWNIDWDLLIQELNSQLPSDIKVNAIKHVTQSFNVKHQAD 117
>UniRef50_A2QZ58 Cluster: Putative frameshift; n=1; Aspergillus
niger|Rep: Putative frameshift - Aspergillus niger
Length = 567
Score = 34.7 bits (76), Expect = 2.3
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQR 551
+R +KK+A+LLGYSG Y GMQ + +TI I++ + + + + R
Sbjct: 114 QRRPKKKVAVLLGYSGTGYKGMQLSETEKTIEGELFAAFVAAGAISKANATDPKKSSLVR 173
Query: 552 SSRD*QG 572
+R +G
Sbjct: 174 CARTDKG 180
>UniRef50_Q5NG36 Cluster: tRNA pseudouridine synthase A; n=11;
Francisella tularensis|Rep: tRNA pseudouridine synthase
A - Francisella tularensis subsp. tularensis
Length = 258
Score = 34.7 bits (76), Expect = 2.3
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 560 GLTRVCPLLNKFVSLKLPLEVNVEEINKRLPETIKVFAVKRVTNRFNSK 706
G+ ++N + + PL +N LP+ IK+ AV++V N FNS+
Sbjct: 54 GVHATSQIVNFYSNADRPLSAWQRGVNALLPQDIKILAVQQVDNNFNSR 102
>UniRef50_A7NY39 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 504
Score = 34.3 bits (75), Expect = 3.1
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 336 ETKPPGEIKKPYERIKRKKMAMLLGYSGVEYYG--MQRN-PGVQTIXXXXXXXXXXXXYI 506
E+ P ++K +E ++KK+ M +GY G Y G MQR+ + TI I
Sbjct: 47 ESNPDQSVQK-WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGI 105
Query: 507 TQEDFENAQNAQFQRSSRD*QG 572
++ N + RSSR +G
Sbjct: 106 RDSNYGNLHKIGWDRSSRTDKG 127
>UniRef50_Q4UIU5 Cluster: Pseudouridylate synthase; n=2;
Theileria|Rep: Pseudouridylate synthase - Theileria
annulata
Length = 478
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 626 VEEINKRLPETIKVFAVKRVTNRFNSKSKCN 718
V+ +N LPE I+ F ++RVT F+++S C+
Sbjct: 198 VQRLNAALPEDIRCFKIQRVTKGFDARSLCS 228
>UniRef50_A2QIQ0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 125
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -3
Query: 651 GNLLFISSTLTSKGSLSETNLFSSGHTLV-SPWSY 550
GNLL I+ST T+ +LS +++ + GH+L+ S W Y
Sbjct: 42 GNLLLIASTRTNDCTLSRSHISTLGHSLISSQWMY 76
>UniRef50_O23271 Cluster: Putative uncharacterized protein dl3100w;
n=2; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl3100w - Arabidopsis thaliana (Mouse-ear cress)
Length = 250
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 144 SNLNKTLPRHPVRTEKNILAITSARLLS-VMEAADVTKDEENK 269
+NL + RHP + KN +++ R+L +MEAADVT+D + K
Sbjct: 68 TNLGSKVIRHPEKIFKNPGSVSYRRMLPYLMEAADVTRDGDAK 110
>UniRef50_O22928 Cluster: Putative tRNA pseudouridine synthase; n=1;
Arabidopsis thaliana|Rep: Putative tRNA pseudouridine
synthase - Arabidopsis thaliana (Mouse-ear cress)
Length = 510
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 369 YERIKRKKMAMLLGYSGVEYYGMQ---RNPGVQTIXXXXXXXXXXXXYITQEDFENAQNA 539
+E ++KK+ + +GY G +Y G+Q +P ++TI I ++ +
Sbjct: 57 WESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGIRDSNYGDLHKI 116
Query: 540 QFQRSSRD*QGCVRC*TSLS 599
+ RSSR +G TS+S
Sbjct: 117 GWARSSRTDKGVHSLATSIS 136
>UniRef50_A0B7V0 Cluster: Pseudouridylate synthase; n=1;
Methanosaeta thermophila PT|Rep: Pseudouridylate
synthase - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 267
Score = 33.5 bits (73), Expect = 5.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 390 KMAMLLGYSGVEYYGMQRNPGVQTI 464
K+A+ + Y G YYG QR PG++T+
Sbjct: 2 KIALKIAYLGDRYYGFQRQPGLRTV 26
>UniRef50_Q1NSM9 Cluster: Putative uncharacterized protein; n=1;
delta proteobacterium MLMS-1|Rep: Putative
uncharacterized protein - delta proteobacterium MLMS-1
Length = 90
Score = 33.1 bits (72), Expect = 7.1
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 216 RLLSVMEAADVTKDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKM 395
R L+++ D E+ V + RY R +W+T GE K+ + RI R +
Sbjct: 17 RSLALVNTYDARGAEKPAMGFTVAKRKGIRYVGGRGVTEWKTMAGGEKKRGHGRISRNPL 76
Query: 396 AMLLGYSGVE 425
+L+G G+E
Sbjct: 77 ILLVGRIGIE 86
>UniRef50_A6RCJ6 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 634
Score = 33.1 bits (72), Expect = 7.1
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 372 ERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQR 551
+R +KK+A++LGYSG Y GMQ + +TI I++ + + + + R
Sbjct: 116 QRRPKKKVAVMLGYSGSGYKGMQLSETEKTIEGDLFTAFVAAGAISKANATDPKKSSLVR 175
Query: 552 SSRD*QG 572
+R +G
Sbjct: 176 CARTDKG 182
>UniRef50_A5E087 Cluster: Protein POS5; n=2; Saccharomycetales|Rep:
Protein POS5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 535
Score = 33.1 bits (72), Expect = 7.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +3
Query: 267 KSIDIVPNKLLTRYNKRRAHR----DWETKPPGEI---KKPYERIKRKKMAMLLGYSGVE 425
+S + +P L Y K + HR W T PP + KKP++ R+ M L+ + VE
Sbjct: 87 ESCENLPKARLPDYVKSQQHRLFNIIWRTSPPKNVLMVKKPWDATVREAMIQLINHLHVE 146
Query: 426 Y 428
Y
Sbjct: 147 Y 147
>UniRef50_Q65UU6 Cluster: RfbX protein; n=2; Pasteurellaceae|Rep:
RfbX protein - Mannheimia succiniciproducens (strain
MBEL55E)
Length = 430
Score = 32.7 bits (71), Expect = 9.4
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = -2
Query: 427 YSTPEYPSSIAIFFLLILSYGFLISPGGLVSQSRCARRLLYLVNSLFGTISIDLFSSSFV 248
Y + S +FF +++ +GF +S VS R + L + S I L SSF+
Sbjct: 58 YGLVMFAQSFILFFNILVDFGFNLSATKEVSIHRDDKNKLIEIYSSVMVIKFLLILSSFI 117
Query: 247 TSAASITDSKRALVMAKIFFSVLTGCLGKVLF 152
+ I +R + ++F +G+ LF
Sbjct: 118 ILSIIIFSFERFSLNKGVYFLSFLWVIGQALF 149
>UniRef50_Q9TAH8 Cluster: ATP synthase A chain; n=1; Cafeteria
roenbergensis|Rep: ATP synthase A chain - Cafeteria
roenbergensis
Length = 376
Score = 32.7 bits (71), Expect = 9.4
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = -2
Query: 388 FLLILSYGFLISPGGLVSQSRCARRLLYLVNSLFGTISIDLFSSSFVTSAASITDSKRAL 209
F LIL + FL+S G L + + + L ++ F T S+DLFSS+ + +
Sbjct: 152 FFLILLFFFLLSSGSLSNLTLFPKGDLDHFSNSFYTFSLDLFSSTLELRTEKEVQNFQEF 211
Query: 208 ---VMAKIFFSVLTGCLGKVLFK-LLTNNLIN 125
V A F L +G + F +T+NL N
Sbjct: 212 FWKVNAIFGFIFLANSIGMIPFSTTITSNLTN 243
>UniRef50_Q5CPW7 Cluster: Pus1p-like type II pseudousynthas TruA;
n=2; Cryptosporidium|Rep: Pus1p-like type II
pseudousynthas TruA - Cryptosporidium parvum Iowa II
Length = 501
Score = 32.7 bits (71), Expect = 9.4
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 584 LNKFVSLKLPLEVNVEEINKRLPET-IKVFAVKRVTNRFNSKSKCN 718
L++F+ L L+ V ++N+ L T IKVF + RVT F++++ C+
Sbjct: 155 LDEFLDELLILDYIVTKLNELLESTKIKVFKIFRVTKNFDARTDCS 200
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,956,272
Number of Sequences: 1657284
Number of extensions: 13073356
Number of successful extensions: 35776
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 34517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35761
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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