Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30683
         (722 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24384| Best HMM Match : I-set (HMM E-Value=4.3e-31)                 31   0.72 
SB_11748| Best HMM Match : Ank (HMM E-Value=1.7e-21)                   29   2.9  
SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)                     29   3.8  
SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017)           29   5.0  
SB_44577| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  
SB_23550| Best HMM Match : CP12 (HMM E-Value=4.9)                      28   8.8  
SB_13967| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  

>SB_24384| Best HMM Match : I-set (HMM E-Value=4.3e-31)
          Length = 1399

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216  RLLSVMEAADVTKDEENKSIDIVPNKLLTRYNKRRAHR--DWETKPPGE 356
            R  SV+ A DV   EEN +++IV ++++ +   RRA    D  T PP +
Sbjct: 1106 RYASVV-ATDVPAGEENNTVEIVTDEIVVKVESRRAKTLYDGHTFPPND 1153


>SB_11748| Best HMM Match : Ank (HMM E-Value=1.7e-21)
          Length = 564

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/79 (24%), Positives = 36/79 (45%)
 Frame = +3

Query: 117 SVSLIRLFVSNLNKTLPRHPVRTEKNILAITSARLLSVMEAADVTKDEENKSIDIVPNKL 296
           ++ ++R+ + +LN+      VR  ++      A  L   E A + +DE N S++I  N  
Sbjct: 127 NLEIVRVLLESLNRFQISVDVRNAEDRTPYLEAVKLGREECAQILRDEGNASMNIQVNPF 186

Query: 297 LTRYNKRRAHRDWETKPPG 353
           L   +  R  +  E +  G
Sbjct: 187 LDFASGERVVKHGEVRSAG 205


>SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 639

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +3

Query: 234 EAADVTKDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKMAMLLGY 413
           E    T +++N+  D +  K    +NK   H + ++   G++ K  ERI++K+ A   G 
Sbjct: 334 ELDGATHNKQNE--DKIDEKNENEHNKLNEHCEGDSHNEGKMDKENERIEQKEDATKSGA 391

Query: 414 SG 419
           SG
Sbjct: 392 SG 393


>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
          Length = 2568

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 24/92 (26%), Positives = 38/92 (41%)
 Frame = -2

Query: 418  PEYPSSIAIFFLLILSYGFLISPGGLVSQSRCARRLLYLVNSLFGTISIDLFSSSFVTSA 239
            P +P +  +FF   +    L + G  V          Y  N+ F  I  ++  S+F+T+ 
Sbjct: 2100 PVFPDNAPVFFSAYIDVATLTA-GTTVKLQIQLNDNTY-ANANFDVID-NIVLSNFLTTG 2156

Query: 238  ASITDSKRALVMAKIFFSVLTGCLGKVLFKLL 143
            ASIT+         I+  +  G  G   F LL
Sbjct: 2157 ASITNGPGTFKRLTIYVDIKAGAFGTSFFILL 2188


>SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017)
          Length = 453

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -3

Query: 348 EVWSPNRDVPGVCCTSLIAYSALYRLTYFLHLS 250
           + +SP  D   +   SL+ +SA+YRL+YF  LS
Sbjct: 378 DTFSPKPDA--IFIPSLVLFSAVYRLSYFCALS 408


>SB_44577| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 157

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 156 KTLPRHPVRTEKNILAITSARLLSVMEAADVTKDEENKSIDIVPNKLLTRYNKRRA 323
           KT PR P  T + +L   +ARLL +  +A + K      ++++ +K   R    RA
Sbjct: 46  KTDPRQPRGTGEKLLLRQAARLLGLTSSAALPKRAIQSDLELLNSKAPMRKAPMRA 101


>SB_23550| Best HMM Match : CP12 (HMM E-Value=4.9)
          Length = 87

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 554 LQGLTRVCPLLNKFVSLKLPLEVNVEEINKRLPETIKVFAVKRVTN 691
           L+G  +V   L   +  K       EE++K LPE +++F   RV+N
Sbjct: 2   LEGSEKVARELFAMLEPKQKYIATQEEVDKHLPEILELFKKVRVSN 47


>SB_13967| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 283

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -3

Query: 681 LLTANTLIVSGNLLFISSTLTSKGSLSETNLFSSGHTLVSPWSYV 547
           +LT   ++  G +L +   L    +L+   + + G  L+SPWS +
Sbjct: 238 VLTLGQVLTLGQVLALGQVLALGQALALGQVLALGQVLISPWSSI 282


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,977,634
Number of Sequences: 59808
Number of extensions: 414776
Number of successful extensions: 1081
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)