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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30683
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.9  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   8.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 687 VTLLTANTLIVSGNLLFISSTLTSKGSLSETNLF 586
           + L   N ++V GN+L I +   +    + TN+F
Sbjct: 70  IVLAIVNVMVVLGNVLVILAVYHTSKLRNVTNMF 103


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 381 KRKKMAMLLGYSGVEYYGMQRNPGVQTI 464
           ++KK   L+G  G+   G+Q N   +TI
Sbjct: 92  QKKKKRSLMGAQGLSIRGLQINHEDETI 119


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 351 GEIKK-PYERIKRKKMAMLLGYSGVEYYGMQRNPGVQT 461
           G IK   YE ++      L G +G+E+ G  +N  +Q+
Sbjct: 297 GPIKDIDYENVQSLYQPHLRGLNGLEFAGRPQNLQLQS 334


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 309 CTSLIAYSALYRLTYFLHLSLRRQL 235
           C  + + SALYRL  +L     R +
Sbjct: 28  CKDITSTSALYRLKLYLFCDYDRDI 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,908
Number of Sequences: 438
Number of extensions: 4077
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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