Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30682
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 33 0.17
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 33 0.23
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 33 0.23
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet... 33 0.23
Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 30 2.1
Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical ... 29 5.0
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 28 6.6
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 28 6.6
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 28 6.6
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 8.7
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 503 HNLSFYHESAKKFTGRGNLACVHYSGKKAFSNRRPLYKELSIRDDVNLLSFYAKNRLAAA 682
HN S SA + G+ A + + RRP E + ++ +S Y N L A
Sbjct: 5 HNTSCISLSALEQQPSGSSAAIFPPSISRSTQRRPEPLEDQLLMNMQNVSIYTTNDLDLA 64
Query: 683 GLAVENATVKLLPWRPS 733
L +++ T+ PW+P+
Sbjct: 65 SLGIQSVTMTGNPWQPN 81
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 232 PTPPSTGHLCRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 366
PTP HLC L L ++DF+ +PS++R C F+ LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 232 PTPPSTGHLCRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 366
PTP HLC L L ++DF+ +PS++R C F+ LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187
>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
protein 3 protein.
Length = 1599
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -2
Query: 155 GTSRVELPTEMSDGKSVQPSRCRWTCRADASCRSHSRIPWLMLVLS 18
GT+R LPT D KS+QP S H R PW LVL+
Sbjct: 922 GTTRSRLPT---DPKSLQPPAASTASTGSGSFVPHQRKPWTALVLA 964
>Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical
protein F35E2.1 protein.
Length = 345
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 269 DFLRSEATKTFEDETRRIRADTAALIHRA--RSVVPRAKSLAPLDTIYSYSYGEPIPYRF 442
+F+ K FE+E + I++ L +SV+P SL L + + +G P+P F
Sbjct: 215 NFVILRFVKHFENENKNIQSKIIQLTQSLLIQSVIPVIVSLPLLLLSFEFYFGIPMPSSF 274
Query: 443 SNDAYIAKLLVPLRSVADSI 502
+ Y L P SI
Sbjct: 275 GSTWYALTFLGPFLMPLSSI 294
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 501 STIFPSITSQPRSSLDAATSRACTTPVRRPSPT 599
ST + TS P +S+ AAT+ TT +PSPT
Sbjct: 616 STSTTAYTSTPTASIPAATAITTTTAPPKPSPT 648
>Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical
protein F16D3.6 protein.
Length = 341
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 DFLRSEATKTFED-ETRRIRADTAALIHRARSVVPRAKSLAPLDTIYSYSYGEPIPYRFS 445
+F+ K FE+ +++RI+ + LI +SV+P SL L + + +G P+P F
Sbjct: 215 NFVILRFVKHFENIQSKRIQLTQSLLI---QSVIPVIVSLPLLLLSFEFYFGIPMPSSFG 271
Query: 446 NDAYIAKLLVPLRSVADSI 502
+ Y L P SI
Sbjct: 272 STWYALTFLGPFLMPLSSI 290
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 516 SITSQPRSSLDAATSRACTTPVRRPSPTVGHFTRSSASGMT*TCSRFTRRTGSRPPVWP 692
S +S S A ++ + TPV S T+G T S++S + T S + TGS V P
Sbjct: 98 SSSSYATVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVP 156
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 516 SITSQPRSSLDAATSRACTTPVRRPSPTVGHFTRSSASGMT*TCSRFTRRTGSRPPVWP 692
S +S S A ++ + TPV S T+G T S++S + T S + TGS V P
Sbjct: 305 SSSSYATVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVP 363
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 516 SITSQPRSSLDAATSRACTTPVRRPSPTVGHFTRSSASGMT*TCSRFTRRTGSRPPVWP 692
S +S S A ++ + TPV S T+G T S++S + T S + TGS V P
Sbjct: 305 SSSSYATVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVP 363
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 29.5 bits (63), Expect = 2.8
Identities = 28/88 (31%), Positives = 36/88 (40%)
Frame = +3
Query: 477 PYAASRIASTIFPSITSQPRSSLDAATSRACTTPVRRPSPTVGHFTRSSASGMT*TCSRF 656
P AS + PS TS+ S+ A + P+R SP +TRS + G S
Sbjct: 393 PVGASSQSKPPAPSPTSRETDSIPEAPAE----PIRNISPPQPRWTRSQSRGR----SEA 444
Query: 657 TRRTGSRPPVWPSRMQQLNCYLGGRAAN 740
TRR+ PP PS GG N
Sbjct: 445 TRRS---PPKGPSAPPAYTLPFGGSTPN 469
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +3
Query: 435 TVSAMTLTLLSFWCPYAASRIASTIFPSITSQPRSSLDAATSRACTTPVRRPSPTVGHFT 614
T + T T + P + +T P+ T+Q + T+ TTP +PT T
Sbjct: 233 TPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTT 292
Query: 615 RSSASGMT*TCSRFTRRTGS 674
+ T T ++ T+ T +
Sbjct: 293 AKTTKSTT-TTTKTTKTTST 311
>AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical
protein T10B11.6 protein.
Length = 325
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 199 GWADPDPHHVMRHIRVRHESSYR 131
GWA +P H+ ++I+V ++ YR
Sbjct: 75 GWAGANPKHIDKYIKVYNDEGYR 97
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 206 LRELDRIAYRRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIH--RARSVVPRAK 379
L+ L ++ + RRP +DD+ + F+D+ + A +H R +V +
Sbjct: 363 LKWLPKLLFMRRP------IDDY-----EEKFDDKKKPKDGKIALSVHAHRVSNVGNNIR 411
Query: 380 SLAPLDTIYSYSYGEPIPYRFSNDAYIAKLL 472
+ DTI Y P+ F N +IA+LL
Sbjct: 412 NATIDDTIQKMYYSPPVVKAFENICFIAELL 442
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 206 LRELDRIAYRRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIH--RARSVVPRAK 379
L+ L ++ + RRP +DD+ + F+D+ + A +H R +V +
Sbjct: 363 LKWLPKLLFMRRP------IDDY-----EEKFDDKKKPKDGKIALSVHAHRVSNVGNNIR 411
Query: 380 SLAPLDTIYSYSYGEPIPYRFSNDAYIAKLL 472
+ DTI Y P+ F N +IA+LL
Sbjct: 412 NATIDDTIQKMYYSPPVVKAFENICFIAELL 442
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 206 LRELDRIAYRRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIH--RARSVVPRAK 379
L+ L ++ + RRP +DD+ + F+D+ + A +H R +V +
Sbjct: 363 LKWLPKLLFMRRP------IDDY-----EEKFDDKKKPKDGKIALSVHAHRVSNVGNNIR 411
Query: 380 SLAPLDTIYSYSYGEPIPYRFSNDAYIAKLL 472
+ DTI Y P+ F N +IA+LL
Sbjct: 412 NATIDDTIQKMYYSPPVVKAFENICFIAELL 442
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 474 CPYAASRIASTIFPSITSQPRSSLDAATSRACTTPVRRPSPTVGHFTRSSASGMT*TCSR 653
C +A + +T + TS R+ + TSR+C+T + + T ++ +G T ++
Sbjct: 588 CSHATTIRRATSTTTRTS--RTGVPTTTSRSCSTTIWTTATTTPATAATTPAGQTPIPTK 645
Query: 654 FTRRTGSRP-PVWPSRMQQLNCYL 722
+ G+R P+ ++ LN YL
Sbjct: 646 DRQEIGTRTIPIEYLDIRSLNFYL 669
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,273,832
Number of Sequences: 27780
Number of extensions: 370360
Number of successful extensions: 1130
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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