Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30681
(457 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 27 0.083
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 27 0.083
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 27 0.083
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 27 0.083
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 1.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 2.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 2.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 2.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 3.1
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 5.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 7.2
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 7.2
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 7.2
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 20 9.5
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.083
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 175 EVFAAHQVQHADLKPKLPAVASPGVS 252
E F+ HQ+Q ++KP L A P +S
Sbjct: 334 EGFSTHQIQVLEIKPVLGGTALPDIS 359
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.083
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 175 EVFAAHQVQHADLKPKLPAVASPGVS 252
E F+ HQ+Q ++KP L A P +S
Sbjct: 334 EGFSTHQIQVLEIKPVLGGTALPDIS 359
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.083
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 175 EVFAAHQVQHADLKPKLPAVASPGVS 252
E F+ HQ+Q ++KP L A P +S
Sbjct: 334 EGFSTHQIQVLEIKPVLGGTALPDIS 359
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.083
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 175 EVFAAHQVQHADLKPKLPAVASPGVS 252
E F+ HQ+Q ++KP L A P +S
Sbjct: 334 EGFSTHQIQVLEIKPVLGGTALPDIS 359
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 23.4 bits (48), Expect = 1.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 9 QAYTPRGHPTAPGRSREPIS*SACPIARKPAGSHQTNLFGNTS 137
Q+Y P G+ T G + + + P A A H+ N F T+
Sbjct: 246 QSYRPTGNITPHGSNTSSLITTPSPSASPLAYQHEYNSFNWTA 288
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 294 DYSAVSECFDGCTEG 250
+YSA S+ F C EG
Sbjct: 595 EYSAASDAFTHCPEG 609
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 294 DYSAVSECFDGCTEG 250
+YSA S+ F C EG
Sbjct: 828 EYSAASDAFTHCPEG 842
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 294 DYSAVSECFDGCTEG 250
+YSA S+ F C EG
Sbjct: 828 EYSAASDAFTHCPEG 842
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.8 bits (44), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
Frame = +1
Query: 154 CGIECKDEV-FAAH--QVQHA 207
CG+EC D+V F H +V H+
Sbjct: 504 CGVECSDKVSFFLHIARVSHS 524
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 75 ACPIARKPAGSHQTNLFGNTSIASRIMRYRVQR 173
A P+AR + L G +S ++R R+ +QR
Sbjct: 244 ARPLARTCRDNRLLVLAGTSSPSNRFTRHLIQR 276
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 20.6 bits (41), Expect = 7.2
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 94 SRPDHTRQTCLATHR 138
+RP +Q C+ TH+
Sbjct: 557 NRPADCQQNCMCTHK 571
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 20.6 bits (41), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 93 KPAGSHQTNLFGNTSI 140
K SH+TNL N S+
Sbjct: 122 KNRDSHETNLLRNVSV 137
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 20.6 bits (41), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 93 KPAGSHQTNLFGNTSI 140
K SH+TNL N S+
Sbjct: 122 KNRDSHETNLLRNVSV 137
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 9 QAYTPRGHPTAPGR 50
+ YT HP PGR
Sbjct: 347 EEYTRTTHPNEPGR 360
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,448
Number of Sequences: 336
Number of extensions: 2143
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -