Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30680
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0111 - 12638078-12639328,12640886-12641146 93 2e-19
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571 91 5e-19
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 46 2e-05
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325... 46 3e-05
03_01_0439 + 3409422-3409795,3410672-3410897,3411004-3411282,341... 37 0.009
10_08_0003 - 13992276-13992311,13992461-13992598,13992682-139928... 36 0.020
02_05_1191 + 34856635-34856775,34856878-34856942,34857096-348571... 35 0.047
06_03_0588 + 22567820-22570802,22570917-22571269 32 0.33
05_01_0429 + 3399266-3399708,3401320-3401382,3403919-3404345,340... 31 0.44
10_06_0167 + 11401984-11402023,11402024-11402293,11402499-114026... 30 1.0
01_05_0624 + 23772613-23774671,23774737-23775596 29 3.1
11_06_0126 - 20378611-20379719,20380081-20381239 28 4.1
05_05_0001 + 21410408-21411391 28 5.4
11_01_0468 + 3629974-3631051,3631102-3632649,3632766-3633133 27 7.2
10_08_0330 - 16816497-16819952 27 7.2
02_04_0610 + 24335153-24337724,24337835-24338256 27 7.2
01_05_0622 + 23766226-23766835,23767025-23767356,23767516-23767626 27 7.2
03_05_0738 + 27267514-27268279,27268373-27268395 27 9.5
>01_03_0111 - 12638078-12639328,12640886-12641146
Length = 503
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/65 (61%), Positives = 54/65 (83%)
Frame = +2
Query: 17 VKVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREAN 196
VKV+++K TD ILG HI+ PG GE+I+EAVLA +YGA++ED+AR CHAHPT +EAL+EA
Sbjct: 434 VKVVAEKETDKILGVHIMAPGAGEIIHEAVLALQYGASSEDIARTCHAHPTVSEALKEAC 493
Query: 197 LAAYS 211
L ++
Sbjct: 494 LQTFT 498
>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
Length = 527
Score = 91.1 bits (216), Expect = 5e-19
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +2
Query: 17 VKVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREAN 196
VKV+++K TD ILG HI+ P GE+I+EAVLA +YGA++ED+AR CHAHPT +EAL+EA
Sbjct: 458 VKVVAEKETDRILGVHIMAPNAGEIIHEAVLALQYGASSEDIARTCHAHPTVSEALKEAC 517
Query: 197 LAAY 208
L Y
Sbjct: 518 LQTY 521
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +2
Query: 20 KVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANL 199
K++ T ILG HI+G +LI+EA A G +D+ HAHPT +E L E
Sbjct: 484 KMIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRVQDIKFAVHAHPTLSEVLDELFK 543
Query: 200 AA 205
AA
Sbjct: 544 AA 545
>05_01_0413 -
3253345-3253461,3253595-3253666,3253763-3253876,
3254050-3254163,3254420-3254520,3254616-3254694,
3254789-3254863,3254955-3255017,3255281-3255361,
3255449-3255574,3255898-3256022,3256722-3256839,
3257420-3257554,3258029-3258175,3259016-3259321
Length = 590
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +2
Query: 20 KVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANL 199
K++ T ILG HI+G +LI+EA A G +D+ HAHPT +E L E
Sbjct: 490 KLIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRLQDIKFAVHAHPTLSEVLDELFK 549
Query: 200 AA 205
AA
Sbjct: 550 AA 551
>03_01_0439 +
3409422-3409795,3410672-3410897,3411004-3411282,
3411374-3411550,3411653-3411706,3411806-3411954,
3412534-3412597,3412670-3412840,3412922-3413059,
3413180-3413215
Length = 555
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 14 FVKVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAE 178
F+K++ TT+ ++G H+ G E+I +A + G +D HPT AE
Sbjct: 471 FMKLIVCATTNKVVGVHMCGEDAPEIIQGVAIAVKAGLTKQDFDATIGIHPTSAE 525
>10_08_0003 -
13992276-13992311,13992461-13992598,13992682-13992852,
13992926-13992989,13993404-13993552,13993700-13993753,
13993894-13994034,13994134-13994412,13994518-13994743,
13995328-13995734
Length = 554
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 14 FVKVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEAL 184
++KV+ T+ +LG H+ G E+I +A + G ++ HPT AE L
Sbjct: 470 YMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDATIGVHPTTAEEL 526
>02_05_1191 +
34856635-34856775,34856878-34856942,34857096-34857165,
34857499-34857570,34857668-34857871,34858793-34858866,
34858965-34859048,34859582-34859669,34859763-34859844,
34860178-34860251,34860474-34860581,34860683-34860747,
34861317-34861430,34861644-34861743,34861840-34861893,
34861972-34862067
Length = 496
Score = 34.7 bits (76), Expect = 0.047
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 17 VKVLSDKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAE 178
+K++ D TD +LG + GP E+I +A + GA HP+ AE
Sbjct: 421 MKLVVDSETDKVLGASMCGPDAPEIIQGMAVALKCGATKATFDSTVGIHPSAAE 474
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIP 334
+PS+L N +IYLS I N+ GTIP
Sbjct: 285 IPSSLGNLSSLIYLSLIANNLVGTIP 310
>05_01_0429 +
3399266-3399708,3401320-3401382,3403919-3404345,
3404863-3405141
Length = 403
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 65 IIGPGGGELINEAVLAQEYGAAAEDVARVCHAH 163
++G GGG I ++ E GA A VA C AH
Sbjct: 28 VVGGGGGVTIATVDMSAERGAVARQVATACAAH 60
>10_06_0167 +
11401984-11402023,11402024-11402293,11402499-11402632,
11402737-11403663
Length = 456
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIP 334
+PS+LSN + L F N+RGTIP
Sbjct: 324 IPSSLSNLTFLSDLDLSFNNLRGTIP 349
>01_05_0624 + 23772613-23774671,23774737-23775596
Length = 972
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIP 334
+PS+LSN + YL+ + N+ G IP
Sbjct: 833 IPSSLSNLTFLSYLNLSYNNLSGRIP 858
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIP 334
+PSTLSN + L + N+ GTIP
Sbjct: 655 IPSTLSNLSYLSNLDLSYNNLSGTIP 680
>05_05_0001 + 21410408-21411391
Length = 327
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 71 GPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLA 202
GPG L+ E + +E+GAAA +AR CA+AL E N +
Sbjct: 221 GPGQDGLVGEPISTEEHGAAA--MAR-------CAQALGELNFS 255
>11_01_0468 + 3629974-3631051,3631102-3632649,3632766-3633133
Length = 997
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIP 334
+P +LSN + LSF F + G+IP
Sbjct: 183 IPPSLSNITALRKLSFAFNGITGSIP 208
>10_08_0330 - 16816497-16819952
Length = 1151
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIP 334
+PS+L N +I L+ F N+ G IP
Sbjct: 441 IPSSLGNLKQLIKLALFFNNLTGVIP 466
>02_04_0610 + 24335153-24337724,24337835-24338256
Length = 997
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIPFKSDSFIQ 310
+P +L N +++ L + N++GTIP++ + Q
Sbjct: 451 IPPSLGNPPLLLKLDLTYNNLQGTIPWEISNLRQ 484
>01_05_0622 + 23766226-23766835,23767025-23767356,23767516-23767626
Length = 350
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 411 VPSTLSNTLVIIYLSFIFKNVRGTIP 334
+PS+LS+ + YL+ F N+ G IP
Sbjct: 255 IPSSLSDMASLSYLNLSFNNLSGRIP 280
>03_05_0738 + 27267514-27268279,27268373-27268395
Length = 262
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +2
Query: 80 GGELINEAVLAQEY-----GAAAEDVA---RVCHAHPTCAEALREANLAAYSGK 217
GGEL + V Y AAA VA R CHAH L+ N Y+GK
Sbjct: 184 GGELFDRIVARGRYTERAAAAAARTVAEVVRACHAHGVMHRDLKPENF-LYAGK 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,309,750
Number of Sequences: 37544
Number of extensions: 201064
Number of successful extensions: 629
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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