Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30680
         (536 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.37 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.37 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   0.86 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   6.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.0  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 43  RRNPWDSHYW 72
           RRNPW S YW
Sbjct: 276 RRNPWFSEYW 285


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 43  RRNPWDSHYW 72
           RRNPW S YW
Sbjct: 366 RRNPWFSEYW 375


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 328 FERNRATYVFKYKAQVNYY 384
           FERNR   +  +K +VN+Y
Sbjct: 291 FERNRLQLLESFKRKVNFY 309


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 67  NVSPKDYVCSLIGKHFDETSV 5
           N+  K Y C L  K FD+ ++
Sbjct: 56  NIEEKTYQCLLCQKAFDQKNL 76


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 43  RRNPWDSHYW 72
           RRNPW   +W
Sbjct: 421 RRNPWFVEFW 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,329
Number of Sequences: 438
Number of extensions: 2471
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)