Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30679
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   0.61 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.9  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -3

Query: 703 YIFEKLYTFNAKRPYVEKYLRNRILCWRKV-AQW-WQ 599
           + F  LY+      Y EK ++ ++ CW +   QW WQ
Sbjct: 147 WFFSALYSLPILIFYEEKIVKGKLQCWIEFHPQWKWQ 183


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 342 CRSLRRRLP*TTCAEP 295
           CRS++   P  TC EP
Sbjct: 82  CRSIKNECPEPTCDEP 97


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 603 HH*ATFLQHNILFRKYFSTYGL 668
           H+  T++ +NI+F    +T+GL
Sbjct: 188 HYIFTYMPYNIVFGLCLTTFGL 209


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -3

Query: 673 AKRPYVEKYL--RNRILCWRKVAQW 605
           +KRPY+ KYL  +N ++     +QW
Sbjct: 460 SKRPYIYKYLDKKNVVVQSWGASQW 484


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 495 SKDLTLLHIYEREHIFGKRNWLARSFIS 578
           SK   ++ + + +H FGK N   RSF S
Sbjct: 188 SKYQFVVLVLQLQHRFGKINRTMRSFFS 215


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 495 SKDLTLLHIYEREHIFGKRNWLARSFIS 578
           SK   ++ + + +H FGK N   RSF S
Sbjct: 188 SKYQFVVLVLQLQHRFGKINRTMRSFFS 215


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 382 LIRATISTCVRLSRSQ 429
           L R  I+TC+RLS  Q
Sbjct: 145 LRRIEIATCLRLSEKQ 160


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 522 YEREHIFGKRNWLARSFISRTLCDFG 599
           Y+++H++  +  L+    S +LCD G
Sbjct: 112 YDQQHLYHPQVLLSPGGYSGSLCDQG 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,418
Number of Sequences: 336
Number of extensions: 4145
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)