Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30679
(714 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.41
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.41
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 24 1.2
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 24 1.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 24 1.6
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 23 3.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 6.6
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 6.6
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 6.6
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 8.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.8
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.41
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 147 YFNATYIDHNLITRNHDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKE 320
YF+ TYI + + H+K ++E + TL+ + + L + TL Q + E
Sbjct: 39 YFHHTYIIYESLCGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDE 96
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.41
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 147 YFNATYIDHNLITRNHDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKE 320
YF+ TYI + + H+K ++E + TL+ + + L + TL Q + E
Sbjct: 39 YFHHTYIIYESLCGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDE 96
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 554 LAGEVLHQQNTLRLRLPPLSDFSPT*YSISQI 649
L+ +LH+ +T L +PPL++ P Y S I
Sbjct: 129 LSVAILHRPDTKDLPVPPLTEVFPDKYMDSGI 160
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 554 LAGEVLHQQNTLRLRLPPLSDFSPT*YSISQIL 652
L+ V+H+ +T ++LPP+ + P Y +++
Sbjct: 142 LSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEVM 174
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 554 LAGEVLHQQNTLRLRLPPLSDFSPT*YSISQIL 652
L+ V+H+ +T ++LPP+ + P Y +++
Sbjct: 142 LSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEVM 174
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 67 PRTRNVSRAEGRSPRST 117
PRTR V R++GR T
Sbjct: 1 PRTRRVKRSDGRGNGGT 17
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 611 SVVATEVAECSADEGPRQPVPLSEDVL 531
+ V T VA C + P P+P ++D L
Sbjct: 461 ATVGTTVAPCFEEPLPSLPLPGADDDL 487
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 569 GPRQPVPLSEDVLSLVN 519
GP+ P+ + D SL+N
Sbjct: 43 GPQSPLDMKPDTASLIN 59
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 569 GPRQPVPLSEDVLSLVN 519
GP+ P+ + D SL+N
Sbjct: 43 GPQSPLDMKPDTASLIN 59
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = -2
Query: 221 IKFADTAFVVVTGNEIMVDVGGVEVWYFKLEHRYLVLRGD 102
+KF+ F+V+ + M+D+G + ++H +V G+
Sbjct: 343 VKFSSVQFLVLDEADRMLDMGFLPSIEKMVDHETMVPLGE 382
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 129 TPVSRTARGSALCPGYISSSRPGGR 55
TPV R A+ S+ Y S GGR
Sbjct: 1339 TPVPRLAQDSSEDESYRGPSASGGR 1363
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,719
Number of Sequences: 438
Number of extensions: 4798
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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