Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30675
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical pr...    33   0.31 
U41016-8|ABC71806.1|  212|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z68213-1|CAA92435.2|  487|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical ...    28   6.6  

>U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical
           protein T26C11.2 protein.
          Length = 343

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 544 EPTPK-ESEPFKSVVPDNKPFGYPFDRPV-LPQYFKQPNMFFKKVLVYHEGELFP 702
           +PTPK +SEPF   +P +KP   PF  P+  P+   +P     K +  H+ + FP
Sbjct: 7   KPTPKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKP-KPKPMPKHKPKPFP 60



 Score = 31.1 bits (67), Expect = 0.93
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +1

Query: 529 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRP-VLPQYFKQP---NMFFKKVLVYHEGEL 696
           F  P   +  +SEPF S +P  KP   P  +P  +P++  +P    M F K +  H+ + 
Sbjct: 17  FPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKP 76

Query: 697 FP 702
           FP
Sbjct: 77  FP 78


>U41016-8|ABC71806.1|  212|Caenorhabditis elegans Hypothetical
           protein R11G1.2 protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +1

Query: 478 LMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQ-YFKQPN 654
           L++    Y G   +     Y    T  +S+ F   VP  KP GY  D P+ P+ Y     
Sbjct: 91  LLMDSDEYCGLSIENVYTRYITSETIDQSDTFGYNVP--KPIGYKGDEPIWPRSYGYSAE 148

Query: 655 MFF 663
           MFF
Sbjct: 149 MFF 151


>Z68213-1|CAA92435.2|  487|Caenorhabditis elegans Hypothetical
           protein C01F6.2 protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 550 TPKESEPFKSVVPDNKPFGYPFDRPVLPQ 636
           TPK  +  +  VP N+P    F RPV+P+
Sbjct: 128 TPKTPDVIRQKVPMNEPVNCVFIRPVIPK 156


>Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical
           protein T07D10.3 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 787 IVEFAYFYL*EHNSCALFWCIVR 719
           +++  + YL EH SC LF C VR
Sbjct: 102 LIDARFHYLLEHQSCQLFCCGVR 124


>AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical
           protein H16D19.3 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 787 IVEFAYFYL*EHNSCALFWCIVR 719
           +++  + YL EH SC LF C VR
Sbjct: 90  LIDARFHYLLEHQSCQLFCCGVR 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,504,734
Number of Sequences: 27780
Number of extensions: 349378
Number of successful extensions: 1040
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)