Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30669
(630 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative odorant-b... 52 1e-08
AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding pr... 52 2e-08
AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative odorant-b... 52 2e-08
AY146737-1|AAO12097.1| 119|Anopheles gambiae odorant-binding pr... 37 5e-04
AY146738-1|AAO12098.1| 134|Anopheles gambiae odorant-binding pr... 36 0.001
AY604021-1|AAT38515.1| 118|Anopheles gambiae LZ9988P protein. 35 0.002
AY146735-1|AAO12095.1| 149|Anopheles gambiae odorant-binding pr... 35 0.002
AY146733-1|AAO12093.1| 131|Anopheles gambiae odorant-binding pr... 32 0.017
AJ697724-1|CAG26917.1| 131|Anopheles gambiae putative odorant-b... 32 0.017
AJ697722-1|CAG26915.1| 119|Anopheles gambiae putative odorant-b... 31 0.023
AY146734-1|AAO12094.1| 176|Anopheles gambiae odorant-binding pr... 31 0.040
AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative odorant-b... 31 0.040
AY146728-1|AAO12088.1| 131|Anopheles gambiae odorant-binding pr... 30 0.053
AY146716-1|AAO12076.1| 159|Anopheles gambiae odorant-binding pr... 28 0.21
AY146741-1|AAO12101.1| 131|Anopheles gambiae odorant-binding pr... 28 0.28
AJ697719-1|CAG26912.1| 174|Anopheles gambiae putative odorant-b... 27 0.49
AY146745-1|AAO12105.1| 153|Anopheles gambiae odorant-binding pr... 26 0.86
AJ697725-1|CAG26918.1| 153|Anopheles gambiae putative odorant-b... 26 0.86
AF437886-1|AAL84181.1| 153|Anopheles gambiae odorant binding pr... 26 0.86
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 25 2.0
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 25 2.0
AY146726-1|AAO12086.1| 136|Anopheles gambiae odorant-binding pr... 24 4.6
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 23 6.1
Z22930-2|CAA80514.1| 274|Anopheles gambiae trypsin-related prot... 23 8.0
>AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative
odorant-binding protein OBPjj11 protein.
Length = 135
Score = 52.4 bits (120), Expect = 1e-08
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Frame = +3
Query: 30 MSANSFVVLAFCALAVGVNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKKLGDP 209
M + +VLA +A V ++EEQ+ +++ L +C ++ ++ D++ + GD
Sbjct: 1 MKTIACLVLASAFIACAVATISEEQR----EAARQLAGKCMQQTGASEDDVNRLRS-GDT 55
Query: 210 SGLNS---CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPEN 380
G + CFV CF + AG ++ G T E ++K L SE + ++L C N
Sbjct: 56 EGADRNTRCFVQCFFQGAGFVDQDGSVQ---TDELTQK-LASEYGQEKADELVARCR-NN 110
Query: 381 DKPVSDSDKGCERAKLLLDCFVANKGS 461
D P CER+ LL C++ N+ S
Sbjct: 111 DGP-----DACERSFRLLQCYMENRAS 132
>AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP26 protein.
Length = 131
Score = 52.0 bits (119), Expect = 2e-08
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +3
Query: 42 SFVVLAFCALAVGVNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKKLGDPSGLN 221
+FV +A AL G ALT +QK K + AEC K V + A K GD +G +
Sbjct: 3 TFVAIAVVALIAGTFALTIDQK----KKAEGYAAECVKTTGVPP-ETAAKLKGGDFAGAD 57
Query: 222 S---CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPV 392
CF CF++KAG + G D IEK L+ + D E L + C + P
Sbjct: 58 DKTKCFAKCFLEKAGFMTDKGEIDEKTVIEK----LSVDHDRAKVEGLVKKCNHKEANP- 112
Query: 393 SDSDKGCERAKLLLDCFVANKGS 461
CE A C A KG+
Sbjct: 113 ------CETAFKAYQCIYAAKGA 129
>AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative
odorant-binding protein OBPjj13 protein.
Length = 131
Score = 52.0 bits (119), Expect = 2e-08
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +3
Query: 42 SFVVLAFCALAVGVNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKKLGDPSGLN 221
+FV +A AL G ALT +QK K + AEC K V + A K GD +G +
Sbjct: 3 TFVAIAVVALIAGTFALTIDQK----KKAEGYAAECVKTTGVPP-ETAAKLKGGDFAGAD 57
Query: 222 S---CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPV 392
CF CF++KAG + G D IEK L+ + D E L + C + P
Sbjct: 58 DKTKCFAKCFLEKAGFMTDKGEIDEKTVIEK----LSVDHDRAKVEGLVKKCNHKEANP- 112
Query: 393 SDSDKGCERAKLLLDCFVANKGS 461
CE A C A KG+
Sbjct: 113 ------CETAFKAYQCIYAAKGA 129
>AY146737-1|AAO12097.1| 119|Anopheles gambiae odorant-binding
protein AgamOBP27 protein.
Length = 119
Score = 37.1 bits (82), Expect = 5e-04
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 135 LIAECSKEFSVNQGDIDAAKKLGDPSGLNS-CFVGCFMKKAGIINASGLFDVAATIEKSK 311
L+ C EF + ++ + G+ S NS CF CF+K+AG +N + F+ + +
Sbjct: 15 LVHSCRNEFEIEPSVFESLRA-GNFSVRNSLCFGECFVKRAGFMNDNFTFNRDTIMRFTN 73
Query: 312 KYLTSEEDLKAFEKLTEMCAP 374
++++ E K + T+ P
Sbjct: 74 RFVSKEISEKVYNICTDNVTP 94
>AY146738-1|AAO12098.1| 134|Anopheles gambiae odorant-binding
protein AgamOBP28 protein.
Length = 134
Score = 35.9 bits (79), Expect = 0.001
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Frame = +3
Query: 48 VVLAFCALAVGVNALTEEQKAEITKSSLPLIAE---CSKEFSVNQGDIDAAKKLGDPSGL 218
V+LA CA A LT++Q + +L + + +KE V D D +K D
Sbjct: 8 VLLAVCAAA---QPLTDDQMKKAEGFALGCLEQHKGLNKEHLVLLRDGDFSKVDAD---- 60
Query: 219 NSCFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSD 398
CF+ CF+++A ++A+G IE+ L+ + E L + C+ + V D
Sbjct: 61 TKCFLRCFLQQANFMDAAGKLQNDYVIER----LSLNREKSKVEALVKKCSAGVE--VED 114
Query: 399 SDKGCERAKLLLDCFVANKGS 461
S CE A ++C+ K S
Sbjct: 115 S---CETAFRAVECYHREKAS 132
>AY604021-1|AAT38515.1| 118|Anopheles gambiae LZ9988P protein.
Length = 118
Score = 34.7 bits (76), Expect = 0.002
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +3
Query: 186 AAKKLGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEM 365
+AK+L C V CF +K G +N G E+ K++ E E L +
Sbjct: 36 SAKELDTNGSKIKCLVKCFFEKTGFMNKDGQLQEETITEQLSKFMPRER----IESLVKN 91
Query: 366 CAPENDKPVSDSDKGCERAKLLLDCFVANK 455
C ++D CE A + +C+ NK
Sbjct: 92 C------NFQEAD-ACETAYKVTECYFQNK 114
>AY146735-1|AAO12095.1| 149|Anopheles gambiae odorant-binding
protein AgamOBP25 protein.
Length = 149
Score = 34.7 bits (76), Expect = 0.002
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +3
Query: 186 AAKKLGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEM 365
+AK+L C V CF +K G +N G E+ K++ E E L +
Sbjct: 60 SAKELDTNGSKIKCLVKCFFEKTGFMNKDGQLQEETITEQLSKFMPRER----IESLVKN 115
Query: 366 CAPENDKPVSDSDKGCERAKLLLDCFVANK 455
C ++D CE A + +C+ NK
Sbjct: 116 C------NFQEAD-ACETAYKVTECYFQNK 138
>AY146733-1|AAO12093.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP23 protein.
Length = 131
Score = 31.9 bits (69), Expect = 0.017
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Frame = +3
Query: 45 FVVLAFCALAVGVNALTEEQKAEITKSSLPLIAE----CSKEFSVNQGDIDAAKKLGDPS 212
F V +F L V+A T Q+ ++ +L +AE + GD+ A +
Sbjct: 5 FCVASFFLLVASVHAFTLRQQKMVSIFALECMAETGIGAESLTKLRDGDLTANDRTA--- 61
Query: 213 GLNSCFVGCFMKKAGIINASG---LFDVAATIEKSKKYLTSEEDL-KAFEKLTEMC 368
CF+ CF +K ++A G L +A +EK + +E L K E+ + C
Sbjct: 62 ---KCFMKCFFEKENFMDAEGKLQLEAIATALEKDYERAKIDEMLEKCGEQKEDAC 114
>AJ697724-1|CAG26917.1| 131|Anopheles gambiae putative
odorant-binding protein OBPjj14 protein.
Length = 131
Score = 31.9 bits (69), Expect = 0.017
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Frame = +3
Query: 45 FVVLAFCALAVGVNALTEEQKAEITKSSLPLIAE----CSKEFSVNQGDIDAAKKLGDPS 212
F V +F L V+A T Q+ ++ +L +AE + GD+ A +
Sbjct: 5 FCVASFFLLVASVHAFTLRQQKMVSIFALECMAETGIGAESLTKLRDGDLTANDRTA--- 61
Query: 213 GLNSCFVGCFMKKAGIINASG---LFDVAATIEKSKKYLTSEEDL-KAFEKLTEMC 368
CF+ CF +K ++A G L +A +EK + +E L K E+ + C
Sbjct: 62 ---KCFMKCFFEKENFMDAEGKLQLEAIATALEKDYERAKIDEMLEKCGEQKEDAC 114
>AJ697722-1|CAG26915.1| 119|Anopheles gambiae putative
odorant-binding protein OBPjj12 protein.
Length = 119
Score = 31.5 bits (68), Expect = 0.023
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 210 SGLNSCFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAP 374
+ L CF CF+K+AG +N + F+ + + ++++ E K + T+ P
Sbjct: 40 NSLVECFGECFVKRAGFMNDNFTFNRDTIMRFTNRFVSKEISEKVYNICTDNVTP 94
>AY146734-1|AAO12094.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP24 protein.
Length = 176
Score = 30.7 bits (66), Expect = 0.040
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 225 CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSD 404
CFV CF+ KAG I+ G+ EK LT + +L + C+ E +D+
Sbjct: 91 CFVKCFLDKAGFIDDDGVIQQDVIREK----LTVGIEAGKVNELIKKCSVEG----TDA- 141
Query: 405 KGCERAKLLLDCFVAN 452
C+ A + CF +N
Sbjct: 142 --CDTAYQMYKCFFSN 155
>AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative
odorant-binding protein OBPjj10 protein.
Length = 207
Score = 30.7 bits (66), Expect = 0.040
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 225 CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSD 404
CFV CF+ KAG I+ G+ EK LT + +L + C+ E +D+
Sbjct: 122 CFVKCFLDKAGFIDDDGVIQQDVIREK----LTVGIEAGKVNELIKKCSVEG----TDA- 172
Query: 405 KGCERAKLLLDCFVAN 452
C+ A + CF +N
Sbjct: 173 --CDTAYQMYKCFFSN 186
>AY146728-1|AAO12088.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP21 protein.
Length = 131
Score = 30.3 bits (65), Expect = 0.053
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 4/130 (3%)
Frame = +3
Query: 87 ALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAK-KLGD---PSGLNSCFVGCFMKKA 254
A++ ++ EI KS L +C E + A K +LGD S C + C K
Sbjct: 14 AVSTMEQHEIAKS---LAEQCRAELGGELPEDFATKMRLGDLTLDSETAKCTIQCMFAKV 70
Query: 255 GIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSDKGCERAKLLL 434
G SG + I K K KA E ++C EN+ + + C++A L
Sbjct: 71 GFTLESGAANRDVLIAKLSK---GNPTAKA-EAFADVC--ENN----EGETACDKAFSLY 120
Query: 435 DCFVANKGSF 464
C+ NK F
Sbjct: 121 QCYHKNKSIF 130
>AY146716-1|AAO12076.1| 159|Anopheles gambiae odorant-binding
protein AgamOBP12 protein.
Length = 159
Score = 28.3 bits (60), Expect = 0.21
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 105 KAEITKSSLPLIAECSKEFSVNQGDIDAAKKLGDPSG-LNSCFVGCFMKKAGIINASGLF 281
K + + PL C+++ V + I+ KK P L C C + GI + F
Sbjct: 32 KVTLDAAFYPLFG-CARDLVVPEDLIELYKKRIFPDDQLTCCVFRCLGMRLGIYDDVKGF 90
Query: 282 DVAATIEKSKKYLTSEED 335
DV E+ K L+ +ED
Sbjct: 91 DVDKQYERVKDRLSVDED 108
>AY146741-1|AAO12101.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP10 protein.
Length = 131
Score = 27.9 bits (59), Expect = 0.28
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 225 CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSD 404
CFV CF +K +++ G+ +K + +LT D + + C P
Sbjct: 62 CFVQCFFQKLRLMDEKGV----VLKDKLEVFLTKLMDADKAKDYVQQCDLRRTNP----- 112
Query: 405 KGCERAKLLLDCFVANK 455
C+ A + DC++ K
Sbjct: 113 --CDTAYAVYDCYLGKK 127
>AJ697719-1|CAG26912.1| 174|Anopheles gambiae putative
odorant-binding protein OBPjj9 protein.
Length = 174
Score = 27.1 bits (57), Expect = 0.49
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +3
Query: 93 TEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKKLG----DPSGLNSCFVGCFMKKAGI 260
T +Q E+T IA+C++ F + + + G + + CF+ C++K GI
Sbjct: 57 TVKQVPEVTMQDA--IAQCNRSFIIQPEYLAELNQTGSFPEETDKIPLCFIRCYLKALGI 114
Query: 261 INASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEM 365
+ V + ++ + TS E + E L EM
Sbjct: 115 LTEDD--KVNKEVALARNWATSGETVD--ECLEEM 145
>AY146745-1|AAO12105.1| 153|Anopheles gambiae odorant-binding
protein AgamOBP3 protein.
Length = 153
Score = 26.2 bits (55), Expect = 0.86
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +3
Query: 111 EITKSSLPLIAECSKEFSVNQGDIDAAKKLGDPS----GLNSCFVGCFMKKAGIINASGL 278
E+ + P+ C E ++ DA K+ D C++ C +AG++N G
Sbjct: 42 ELLEKMKPMHDACVAETGASE---DAIKRFSDQEIHEDDKLKCYMNCLFHQAGVVNDKGE 98
Query: 279 FDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSDKGCERAKLLLDCF 443
F K + +L L PE + GCE+A L C+
Sbjct: 99 FHYV----KIQDFLPESMHLITLNWFKRCLYPE-------GENGCEKAFWLNKCW 142
>AJ697725-1|CAG26918.1| 153|Anopheles gambiae putative
odorant-binding protein OBPjj15 protein.
Length = 153
Score = 26.2 bits (55), Expect = 0.86
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +3
Query: 111 EITKSSLPLIAECSKEFSVNQGDIDAAKKLGDPS----GLNSCFVGCFMKKAGIINASGL 278
E+ + P+ C E ++ DA K+ D C++ C +AG++N G
Sbjct: 42 ELLEKMKPMHDACVAETGASE---DAIKRFSDQEIHEDDKLKCYMNCLFHQAGVVNDKGE 98
Query: 279 FDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSDKGCERAKLLLDCF 443
F K + +L L PE + GCE+A L C+
Sbjct: 99 FHYV----KIQDFLPESMHLITLNWFKRCLYPE-------GENGCEKAFWLNKCW 142
>AF437886-1|AAL84181.1| 153|Anopheles gambiae odorant binding
protein protein.
Length = 153
Score = 26.2 bits (55), Expect = 0.86
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +3
Query: 111 EITKSSLPLIAECSKEFSVNQGDIDAAKKLGDPS----GLNSCFVGCFMKKAGIINASGL 278
E+ + P+ C E ++ DA K+ D C++ C +AG++N G
Sbjct: 42 ELLEKMKPMHDACVAETGASE---DAIKRFSDQEIHEDDKLKCYMNCLFHQAGVVNDKGE 98
Query: 279 FDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSDKGCERAKLLLDCF 443
F K + +L L PE + GCE+A L C+
Sbjct: 99 FHYV----KIQDFLPESMHLITLNWFKRCLYPE-------GENGCEKAFWLNKCW 142
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 25.0 bits (52), Expect = 2.0
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 18 QHVKMSANSFVVLAFCALAVG-VNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAK 194
Q + + NSF + F LAVG V+ Q + KS AEC++ V+ D+
Sbjct: 10 QATRATMNSFALSVF-VLAVGAVSVSASLQHYVVEKSFNQAQAECAEYQGVHDDDLLRYV 68
Query: 195 KLGDP 209
K G P
Sbjct: 69 KEGYP 73
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 25.0 bits (52), Expect = 2.0
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 18 QHVKMSANSFVVLAFCALAVG-VNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAK 194
Q + + NSF + F LAVG V+ Q + KS AEC++ V+ D+
Sbjct: 10 QATRATMNSFALSVF-VLAVGAVSVSASLQHYVVEKSFNQAQAECAEYQGVHDDDLLRYV 68
Query: 195 KLGDP 209
K G P
Sbjct: 69 KEGYP 73
>AY146726-1|AAO12086.1| 136|Anopheles gambiae odorant-binding
protein AgamOBP19 protein.
Length = 136
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 411 CERAKLLLDCFVANKGSF 464
CE A +LL CF N F
Sbjct: 116 CEAATILLQCFYKNNPKF 133
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 23.4 bits (48), Expect = 6.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 468 PRNFLCLQRNSRGEVLLFRSPCHCH*LVCHFLE 370
PRNF ++ R VLL +P HC+ + F +
Sbjct: 581 PRNFD--EQTGRARVLLNDNPLHCNCIAYAFAQ 611
>Z22930-2|CAA80514.1| 274|Anopheles gambiae trypsin-related
protease protein.
Length = 274
Score = 23.0 bits (47), Expect = 8.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 318 LTSEEDLKAFEKLTEMCAPENDKPVSDSDKG 410
L + +L EK+ + PE D+P+ + G
Sbjct: 136 LELKNELTFSEKVQPIALPEQDEPIEEGTMG 166
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,153
Number of Sequences: 2352
Number of extensions: 10692
Number of successful extensions: 86
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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