Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30669
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X76538-1|CAA54047.1|  176|Homo sapiens hMpv17 protein.                 33   1.1  
S68430-1|AAD14014.1|  176|Homo sapiens Mpv17 protein.                  33   1.1  
BC016289-1|AAH16289.2|  172|Homo sapiens MPV17 protein protein.        33   1.1  
BC001115-1|AAH01115.1|  176|Homo sapiens MPV17 protein protein.        33   1.1  
AC013413-6|AAY24298.1|  176|Homo sapiens unknown protein.              33   1.1  
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat...    30   5.9  

>X76538-1|CAA54047.1|  176|Homo sapiens hMpv17 protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 180 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 305
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>S68430-1|AAD14014.1|  176|Homo sapiens Mpv17 protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 180 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 305
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>BC016289-1|AAH16289.2|  172|Homo sapiens MPV17 protein protein.
          Length = 172

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 180 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 305
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 79  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 121


>BC001115-1|AAH01115.1|  176|Homo sapiens MPV17 protein protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 180 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 305
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>AC013413-6|AAY24298.1|  176|Homo sapiens unknown protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 180 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 305
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
           ATRX isoform 2 variant protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
 Frame = +3

Query: 168 NQGDIDAAKKLGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAF 347
           N+G  D  +   D  G  SC +   ++K G+   +   D    +E     L  E DL+  
Sbjct: 564 NRGGADCQEVPQDKDGYKSCGLNPKLEKCGLGQENS--DNEHLVENEVSLLLEESDLRRS 621

Query: 348 E--KLTEMCAPENDKPV-SDSDKGC 413
              K T +  P    PV S+SD+ C
Sbjct: 622 PRVKTTPLRRPTETNPVTSNSDEEC 646


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,933,120
Number of Sequences: 237096
Number of extensions: 1506804
Number of successful extensions: 3134
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3134
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)