Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30667
         (684 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    33   0.28 
03_05_0975 + 29333960-29334171,29336442-29336523,29336663-293366...    29   2.6  
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029...    28   6.0  
02_03_0154 + 15797731-15798798                                         28   6.0  
01_06_0873 + 32617428-32617532,32618166-32618234,32619195-326193...    28   6.0  
05_07_0105 - 27716126-27716218,27716548-27716658,27716764-277168...    28   7.9  

>08_02_1091 +
           24256025-24256190,24256806-24257978,24258066-24258733,
           24258994-24260065,24260241-24260563,24260647-24260835,
           24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = +3

Query: 378 SFPTARTHVRRVLAIHSSLVLNSKPKPCEEGCTCKPDYLKLDDNSACVKICECPQMASSP 557
           SFP  R      +  H S   + +  PC+ G + +PDYL    N+    ICE P+M S+P
Sbjct: 308 SFPDKRVDENLKILEHQSSECHVRSPPCD-GSSLRPDYLA---NA----ICEAPKMLSTP 359


>03_05_0975 +
           29333960-29334171,29336442-29336523,29336663-29336695,
           29336803-29336923,29337398-29337577,29337578-29337670,
           29338459-29338566,29338654-29338830,29338937-29338992,
           29339071-29339155,29339994-29340535
          Length = 562

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +2

Query: 53  PLVRQEYCKAGCVCKEGYLKDDSGKCVARENCPNSDL--CSENEIYVKCVQAQCGPMTCS 226
           PLV QE+   G V  + Y+  D+ + V R + PN D+   S N    +  +  C      
Sbjct: 267 PLVLQEFVNHGGVLFKVYIVGDAIRVVRRFSLPNVDVGDLSNNAGVFRFPRVSCASANAD 326

Query: 227 EKDL 238
           + DL
Sbjct: 327 DADL 330


>08_02_1453 - 27199228-27200579,27200712-27202646,27202905-27202966,
            27203525-27203545,27204305-27204344,27204345-27204792,
            27204866-27204964,27205071-27205394,27205446-27205574,
            27205657-27205875,27205976-27206194,27206436-27206669,
            27206773-27206943,27207466-27207577,27207955-27208010,
            27208083-27208181,27208901-27209134,27209258-27209311,
            27209363-27209422
          Length = 1955

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 519  VKICECPQMASSPDCPKL 572
            ++I +CP++A  PDCP L
Sbjct: 1701 LRISDCPKLAGIPDCPVL 1718


>02_03_0154 + 15797731-15798798
          Length = 355

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 41  LMPYPLVRQEYCKAGCVCKEGYLKDDSGKCVARENCPN 154
           L+  PLV QE+   G V  + Y+  D   CV R + P+
Sbjct: 171 LLRAPLVLQEFVNHGGVLFKVYVVGDRATCVRRSSLPD 208


>01_06_0873 +
           32617428-32617532,32618166-32618234,32619195-32619380,
           32619687-32619776,32620389-32620462,32621149-32621260,
           32621413-32621468,32621826-32621880,32621965-32622021,
           32622696-32622797,32623467-32623547,32623756-32623808,
           32625245-32625314,32626540-32626603,32627339-32627487,
           32627564-32627719,32628011-32628108,32628763-32628847,
           32628932-32628997,32629066-32629125,32629408-32629494,
           32630307-32630360,32630538-32630576,32630651-32630779,
           32630859-32630911,32630984-32631032,32632240-32632298,
           32633111-32633259,32633338-32633492,32633719-32633847,
           32633932-32634017,32634220-32634335,32634429-32634541,
           32635335-32635458,32635540-32635658,32636289-32636490,
           32636586-32636757,32637852-32638176,32638442-32638529,
           32638970-32639059,32639169-32639370,32639681-32639705
          Length = 1450

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 130 TFTAIVFQISLFTYASGFAVLLPHQWV-GHK*VLVLSTSL 14
           TF   + +  L TY S F  LLP+Q V  H+   +L TSL
Sbjct: 224 TFALDILEFVLSTYVSVFRALLPYQQVLRHQICSLLMTSL 263


>05_07_0105 -
           27716126-27716218,27716548-27716658,27716764-27716815,
           27716895-27717034,27717298-27717422,27717514-27717638,
           27717853-27717898,27718374-27718947
          Length = 421

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 339 SRATHLPLSSFRYPCLHTHLALQYSRLTNGQGIGKSFSEHVIGPHCAWTH 190
           S ++   L SF+   +  + + +Y R  +GQ +GKS+   + GP C  +H
Sbjct: 164 SSSSSSDLLSFQLDSIIGNCSFRYVR--HGQNMGKSYVSLLFGPCCPLSH 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,475,856
Number of Sequences: 37544
Number of extensions: 408782
Number of successful extensions: 999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)