Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30667
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_45766| Best HMM Match : F5_F8_type_C (HMM E-Value=3.1e-27) 37 0.017
SB_57949| Best HMM Match : PAN (HMM E-Value=0.13) 36 0.031
SB_27190| Best HMM Match : PAN (HMM E-Value=0.13) 36 0.031
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31) 36 0.040
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 36 0.040
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 34 0.093
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 32 0.50
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_18384| Best HMM Match : HSBP1 (HMM E-Value=1.5) 32 0.50
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_47465| Best HMM Match : EGF_CA (HMM E-Value=2.4e-08) 31 0.87
SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_55808| Best HMM Match : Pentaxin (HMM E-Value=1.2e-08) 30 1.5
SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29) 30 2.0
SB_33921| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_31768| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_24750| Best HMM Match : Rad10 (HMM E-Value=5.1) 30 2.0
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 30 2.0
SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 29 2.7
SB_52240| Best HMM Match : DUF1700 (HMM E-Value=4.1) 29 2.7
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_20348| Best HMM Match : Planc_extracel (HMM E-Value=5.4) 29 2.7
SB_53284| Best HMM Match : DUF1279 (HMM E-Value=1.5) 29 3.5
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.5
SB_14512| Best HMM Match : IncA (HMM E-Value=0.12) 29 3.5
SB_786| Best HMM Match : EGF (HMM E-Value=0) 29 3.5
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26) 29 3.5
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25) 29 3.5
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_33986| Best HMM Match : EGF_CA (HMM E-Value=3.5e-17) 29 4.6
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 4.6
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.1
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09) 28 6.1
SB_43564| Best HMM Match : zf-C2H2 (HMM E-Value=1.2) 28 6.1
SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 28 8.1
SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3) 28 8.1
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 28 8.1
SB_23087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_2045| Best HMM Match : EGF (HMM E-Value=0) 28 8.1
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Frame = +2
Query: 86 CVCKEGYLKDDS--GKCVAREN-CPNSDLC--SENEIYVKCVQAQCGPMTCSEKDLPMPC 250
CVCK+GY D K V N C N C +++ CV GP+ C + +P
Sbjct: 262 CVCKDGYHGDGKTCNKNVCHPNPCHNGATCVATDSSFDCDCVAGWTGPL-CQTRQYCIPN 320
Query: 251 PLVRREYCKARCVCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNC--TNPCPPRTCNS 424
P C+ G G CV +EN C N E ++C NPC P C +
Sbjct: 321 P------------CQNG------GTCVPQENGYRCTCQA-NYEGNDCERANPCSPNPCRN 361
>SB_45766| Best HMM Match : F5_F8_type_C (HMM E-Value=3.1e-27)
Length = 255
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 456 PCEEGCTCKPDYLKLDDNSACVKIC 530
PC+EG CKPD+ K DD +C+K C
Sbjct: 81 PCQEGYNCKPDFNK-DDTYSCIKGC 104
>SB_57949| Best HMM Match : PAN (HMM E-Value=0.13)
Length = 230
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 456 PCEEGCTCKPDYLKLDDNSACVKI 527
PC+EG CKPD+ K DD +C+K+
Sbjct: 140 PCQEGYNCKPDFNK-DDTYSCIKV 162
>SB_27190| Best HMM Match : PAN (HMM E-Value=0.13)
Length = 709
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 456 PCEEGCTCKPDYLKLDDNSACVKI 527
PC+EG CKPD+ K DD +C+K+
Sbjct: 100 PCQEGYNCKPDFNK-DDTYSCIKV 122
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 438 LNSKPKPCEEGCTCKPDYLKLDDNSACVKICEC 536
+N +PC GC C PD L + DN CV+ +C
Sbjct: 1241 INGGERPCVSGCYC-PDGLIMHDNGTCVQSMQC 1272
Score = 34.7 bits (76), Expect = 0.071
Identities = 34/129 (26%), Positives = 47/129 (36%), Gaps = 26/129 (20%)
Frame = +2
Query: 74 CKAGCVC-KEGYLKDDSGKCVARENCP---NSDLCSENEIYV-KCVQAQC--GPMTCSEK 232
C GC C KEG L ++ KCV + CP + EI +C C G C+
Sbjct: 1156 CVEGCYCEKEGELMNNEHKCVDKTQCPCYYGDTMYKYGEIRKDRCNNCTCKGGVFDCTNV 1215
Query: 233 DLPMPC------------------PLVRREY-CKARCVCKQGYLKDDSGKCVARENCPN* 355
D C P+ E C + C C G + D+G CV C
Sbjct: 1216 DCEAMCLTRGLVYSDCGITCENLHPINGGERPCVSGCYCPDGLIMHDNGTCVQSMQC--- 1272
Query: 356 ECSGENEEF 382
+C N+ +
Sbjct: 1273 QCKHNNKYY 1281
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 74 CKAGCVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEK 232
C +GC C +G + D+G CV C C N Y P CS K
Sbjct: 1248 CVSGCYCPDGLIMHDNGTCVQSMQCQ----CKHNNKYYDA--GAISPTDCSRK 1294
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 74 CKAGCVCKEGYLKDDSGKCVARENC 148
C GC C EG ++ D GKCV C
Sbjct: 787 CVDGCFCPEGKIQ-DRGKCVDPGQC 810
Score = 28.3 bits (60), Expect = 6.1
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +2
Query: 125 KCVARENCPNSD-LCSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRREYCKARCVCKQG 301
KCV ++ C D LCS Y K C++K + + CK + VC G
Sbjct: 1071 KCV-KDGCMCKDCLCSVAAAYAKA---------CADKGIVIDGWRDTISVCKPKFVCPAG 1120
Query: 302 -YLKDDSGKCVARE-NCPN*ECSGENEEFSNCTNPCPPRTC 418
LK + + R+ CP+ C ++ +N T+ CP R C
Sbjct: 1121 TVLKQCNRDPLTRKLRCPS-TC----DDLANVTDTCPSRRC 1156
>SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)
Length = 801
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 281 RCVCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPPR 412
RCV +G+LK + KC R C C G+NE CT PP+
Sbjct: 459 RCVAFKGHLKTHAKKC-CRPGCRVYNCGGQNEN-KVCTAQAPPK 500
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 35.5 bits (78), Expect = 0.040
Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 8/115 (6%)
Frame = +2
Query: 86 CVCKEGYLKDD-SGKCVAR---ENCPNSDLCSENEIYVKCVQA---QCGPMTCSEKDLPM 244
C C G+ D +C NC N+ C V V + C P S +
Sbjct: 434 CACAPGFTGDRCESRCPKGYYGTNCSNACTCKATNTNVCDVTSGFCHCNP-GWSGRSCYQ 492
Query: 245 PCPLVRREY-CKARCVCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCP 406
PCP C ++C C G +G CV C ++ NC +PCP
Sbjct: 493 PCPGGSWGVNCSSKCDCINGSCDPVTGACVCNRRVTGQRC---DKPCINCNSPCP 544
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 34.3 bits (75), Expect = 0.093
Identities = 41/160 (25%), Positives = 58/160 (36%), Gaps = 23/160 (14%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCV---ARENCPNSDLCSE--NEIYVKCVQAQCGPMTCSEKDLPMPC 250
C CK G+ D G + A C N C++ N C G +E D
Sbjct: 1360 CTCKPGFTGKDCGTEIDECASNPCKNGATCTDRINGFACTCKPGFTGKDCGTEIDECASE 1419
Query: 251 PLVRREYCKAR-----CVCKQGYLKDDSG---------KCVARENCPN*ECSGEN--EEF 382
P C + C CK+GY D G C+ C + +G N E
Sbjct: 1420 PCKNGANCTDKINGFMCTCKEGYTGKDCGTDIDECSSNPCLNEGTCTDQGYTGPNCEVEV 1479
Query: 383 SNC-TNPCP-PRTCNSLIARIK**AQTLRRGMHLQTRLLE 496
+ C ++PC TC LIA + + G H +T + E
Sbjct: 1480 NECQSDPCQNGGTCEDLIASYRCFCKAGYTGRHCETDIDE 1519
Score = 28.3 bits (60), Expect = 6.1
Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 10/121 (8%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCV---ARENCPNSDLCSE--NEIYVKCVQAQCGPMTCSEKDLPMPC 250
C CK G+ D G + A C N C++ N C G +E D
Sbjct: 1208 CACKPGFTGKDCGTEIDECASNPCKNGATCTDRINGFTCTCKPGFTGKDCGTEIDECASK 1267
Query: 251 PLVRREYCKAR-----CVCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPPRT 415
P C R C CK G+ D G + + C + C + + CT+ T
Sbjct: 1268 PCKNGATCTDRINGFRCTCKPGFTGKDCGTEI--DECASNPC----KNGATCTDRINGFT 1321
Query: 416 C 418
C
Sbjct: 1322 C 1322
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 34.3 bits (75), Expect = 0.093
Identities = 32/123 (26%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Frame = +2
Query: 74 CKAGCVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCP 253
C G C+ + +S KC A C + SE V C P + P P
Sbjct: 2171 CTGGYFCQSPGMSTESSKCAAGFYCTSGVNISEPTTGFSGVGGICPPGHECPEGSPNAVP 2230
Query: 254 LVRREYC----KARC-VCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPPRTC 418
+ Y A C +C QG+ +G + +CP F N PC P T
Sbjct: 2231 CLAGFYAPHAQMAACKMCPQGFF--CNGTTITPTDCPAGHYCPNGTRFHN-QFPCQPGTF 2287
Query: 419 NSL 427
N+L
Sbjct: 2288 NNL 2290
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Frame = +2
Query: 74 CKAGCVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPC- 250
C G C+ YL +SG CVA C S + E + G + P PC
Sbjct: 1249 CTPGYYCESDYLSTESGLCVAGYYCNGSTVFPRPENQTNGDRCPKGHFCPTGSSGPQPCW 1308
Query: 251 --PLVRREYCKARCVCK 295
EY + R CK
Sbjct: 1309 PGTYADTEYNQFRNNCK 1325
Score = 27.9 bits (59), Expect = 8.1
Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 5/117 (4%)
Frame = +2
Query: 74 CKAGCVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCP 253
C G C+ + +GKC CP D N C + P S P+ CP
Sbjct: 230 CTGGYYCQGQGKTEPTGKCDPGFYCPGGD---SNPTPYPCTKGHYCPKGTS---APVKCP 283
Query: 254 --LVRREYCKARC-VCKQGYLKDDSGKCVAREN--CPN*ECSGENEEFSNCTNPCPP 409
+ E K C VC +G+ D+ + CP E+S CPP
Sbjct: 284 SGSYQDELQKDSCKVCPEGHFCDNKNDLSDYTSYICPKGYYCPNGTEYST-QYGCPP 339
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
Frame = +3
Query: 429 SLVLNSKPKPCEEGCTCKPDYLKLDDNSA--------CVKICECPQMASSPDCP 566
SLVL K C E TCKP+Y+ A C + +C + DCP
Sbjct: 1291 SLVLQDDEKNCGEPSTCKPNYISCASMKAICIPKMWRCDGMLDCTDKSDEEDCP 1344
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 269 YCKARCVCKQGYLKDDSGKCVARENCPN*E--CSGENEEFSN 388
Y +C CK+GY +DS CV C CSG N N
Sbjct: 806 YGSYKCSCKRGYAHNDSNVCVDVNECTETPYVCSGNNSICEN 847
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCVARENCPNSD-LCSEN 175
C CK GY +DS CV C + +CS N
Sbjct: 811 CSCKRGYAHNDSNVCVDVNECTETPYVCSGN 841
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 32.3 bits (70), Expect = 0.38
Identities = 31/123 (25%), Positives = 43/123 (34%), Gaps = 6/123 (4%)
Frame = +2
Query: 59 VRQEYCKAG-CVCKEGYLK--DDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSE 229
V C+ G CV KE DD G +NCP + C +QC P +
Sbjct: 303 VTDHTCRNGRCVLKEWLCDGMDDCGDSSDEDNCPTRPPYTCPPSDFTCANSQCVPNSF-R 361
Query: 230 KDLPMPCPLVRREY-CKARCVCKQGYLKDDSGKCVARE-NCP-N*ECSGENEEFSNCTNP 400
D C E CK C + D G+C+ C +C+ ++E
Sbjct: 362 CDGENDCGDRSDESGCKPTTTCSANEFRCDDGRCITSTFRCDREFDCTDRSDERGCVNKT 421
Query: 401 CPP 409
C P
Sbjct: 422 CAP 424
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 31.9 bits (69), Expect = 0.50
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +2
Query: 77 KAGCVCKEGYLKDDSGKCV-ARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCP 253
K C C +GY ++ +CV + +C +S+ E+ V+ G C D
Sbjct: 2144 KPVCSCPQGYRLENPYRCVLSNASCASSEFACESGQCVRKSFVCDGDNDC--HDGSDESS 2201
Query: 254 LVRREYCKARCVCKQGYLKDDSGKCV-ARENCPN*ECSGENEEFSNCTN-PCP 406
LV C A C+ G+ ++G+C+ A+ C G+N + + C CP
Sbjct: 2202 LV----C-ASWTCEPGHFSCNNGRCINAKWVCDRENDCGDNSDEARCPEVTCP 2249
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 CTCKPDYLKLDDNSACVKICECPQMA 548
C+C+P YL + D +C + EC A
Sbjct: 2544 CSCRPGYLLMSDGRSCQDVDECKSYA 2569
Score = 29.5 bits (63), Expect = 2.7
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 15/121 (12%)
Frame = +2
Query: 59 VRQEYCKAG-CVCKEGYL--KDDSGKCVARENCPNSDLCSENEIYVKCVQAQC------- 208
V Q CK G C+ +E +DD G + C N C + KC C
Sbjct: 2459 VTQFRCKTGTCITREWRCDHQDDCGDGSDEQQCVNYT-CPNHTF--KCTSGHCIANSSVC 2515
Query: 209 -GPMTCSEKDLPMPCPLVRREYCKA---RCVCKQGY-LKDDSGKCVARENCPN*ECSGEN 373
G C++ C L C A RC C+ GY L D C + C + +G N
Sbjct: 2516 DGDTDCADGSDEKDCDL-GTSTCGAGLFRCSCRPGYLLMSDGRSCQDVDECKSYALNGCN 2574
Query: 374 E 376
+
Sbjct: 2575 Q 2575
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 471 CTCKPDYLKLDDNSACVKICECPQMAS 551
C+C+P + DN C I EC +S
Sbjct: 1188 CSCRPGFTLASDNKTCEDINECLNSSS 1214
Score = 27.9 bits (59), Expect = 8.1
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Frame = +2
Query: 89 VCKEGYLKDDSGKCVAREN-CPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRR 265
+C+ + + D+ KC+ + N C C++ + C KD C + R
Sbjct: 3286 ICRNSHFRCDNNKCIPKWNVCDGVYHCTDKS--DEAPYRSCPARVACRKD-QFKC--LNR 3340
Query: 266 EYCKARCVCKQGYLKDDSGKCVARENCP--N*ECSGENEEFS-NCT 394
R VC DD G CP N C+ N S NCT
Sbjct: 3341 RCVPVRAVCDS---NDDCGDISDELQCPSTNRTCAVNNGGCSQNCT 3383
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.9 bits (69), Expect = 0.50
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 17/90 (18%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKC-------VARENCPNSDLCSENE--IYVKCVQAQCGP-MTCSEKD 235
C C EGY +D GKC + +C + LC+ + +C++ G TC + D
Sbjct: 484 CQCAEGYERDSQGKCADVNECKTGKHDCSVNALCTNTDGTFICRCLRGYIGDGKTCIDFD 543
Query: 236 ---LPMPCPLVRREYCKA----RCVCKQGY 304
LP V E + C+CK G+
Sbjct: 544 ECKLPKNDCDVNAECINSIGSYSCICKPGF 573
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 77 KAGCVCKEGYLKDDSGKCVARENCPNSD-LCSENEI 181
K CVCK GY D G+C + C SD LC N +
Sbjct: 604 KFTCVCKNGYQIVD-GECKDKNECVGSDLLCDPNAL 638
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 16/103 (15%)
Frame = +2
Query: 86 CVCKEGYLKD-----DSGKCV-ARENCPNSDLCSENE--IYVKCVQAQCGP-MTCSEKDL 238
C CK+G+ D D +C +C + C+ +C++ G TC++ D
Sbjct: 402 CECKDGFQGDGQTCTDVDECTDGLHDCNVNAFCTNTPGTFVCRCIRGYQGDGRTCADVDE 461
Query: 239 PMPCPLV--RREYC-----KARCVCKQGYLKDDSGKCVARENC 346
+ E C C C +GY +D GKC C
Sbjct: 462 CKTGQVKCGENEVCANSLGSFTCQCAEGYERDSQGKCADVNEC 504
>SB_18384| Best HMM Match : HSBP1 (HMM E-Value=1.5)
Length = 1072
Score = 31.9 bits (69), Expect = 0.50
Identities = 25/106 (23%), Positives = 45/106 (42%)
Frame = +2
Query: 110 KDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRREYCKARCV 289
+D C R++ + D+ +N ++ V P +E C L+R+++ A+
Sbjct: 582 EDKQQVCSERKSKSDQDIAEDNAWNLEAVTEVTCPWPLTESQKKKVC-LLRKKWDDAKIA 640
Query: 290 CKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPPRTCNSL 427
++K D A E CP ++ + + CPPRT SL
Sbjct: 641 ---DFMKVDVALIEAVE-CPRPSRDSDDRKTAGKVRFCPPRTATSL 682
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +2
Query: 281 RCVCKQGYLKDDSGKC--VARENCPN*ECS 364
RCVCK GY + SG+C V + C N +C+
Sbjct: 217 RCVCKPGYEQALSGQCVPVCTQGCVNGKCT 246
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 269 YCKARCVCK-QGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPC 403
YC +RC C G + D+ GKC N SG+N+ + N C
Sbjct: 388 YC-SRCQCNGHGSICDERGKCSCENNTAEQCHSGQNDCYKNQCTKC 432
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKC--VARENCPNSDLCSENEIYVKCVQAQCGPMTCS 226
CVCK GY + SG+C V + C N C+ ++ C GP CS
Sbjct: 218 CVCKPGYEQALSGQCVPVCTQGCVNGK-CTSPDV-CTCSFGWTGP-NCS 263
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.5 bits (68), Expect = 0.66
Identities = 34/124 (27%), Positives = 45/124 (36%), Gaps = 7/124 (5%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCVARENCPNSDLCS-ENEIYVKCVQAQCGPMTCSEKDLPMPCPLVR 262
C+ G K++ CP L S E E V+C K P C +
Sbjct: 1595 CITIRGSAKEEQQNSF---ECPVKCLTSCEPECPVRCCSGSQTLDLGVSKTCPSWCSVSS 1651
Query: 263 -REYCKARCVCKQGYLKDDSGKCV---ARENCPN*ECS--GENEEFSNCTNPCPPRTCNS 424
+ C ARC C L C R CP CS N +C N CPP+ C S
Sbjct: 1652 CKPDCPARC-CTTEPLSACPATCSPDSCRPECPLICCSVCPPNCSAQSCGNFCPPKCCTS 1710
Query: 425 LIAR 436
+++
Sbjct: 1711 QLSK 1714
Score = 30.7 bits (66), Expect = 1.1
Identities = 39/148 (26%), Positives = 52/148 (35%), Gaps = 22/148 (14%)
Frame = +2
Query: 53 PLVRQEYCKAGC--VCKEGYLKDDSGKCV--ARENCPNSDLCSENEIYVKCVQAQC---- 208
PL + + GC VC E D KC A +CP S CS + +C C
Sbjct: 1335 PLKENKSHQEGCPAVCSESCKPDCPIKCCSNALSSCPQS--CSGDHCGAECPTQCCLLAD 1392
Query: 209 GPMTCSEKDLPMPC-PLVRREYCKARCVC--------KQGYLKDDSGKC--VARENCPN* 355
S P C P C ARC K + +C + CP
Sbjct: 1393 NGQHSSTASCPSACSPSGCNPDCPARCCITVLQPLNEKHNTTAECPSECSETCKPECPVK 1452
Query: 356 ECSGENEEF---SNCTNPCPPRTCNSLI 430
C+GE SNC CP + C +++
Sbjct: 1453 CCTGECPAGCLPSNCKPDCPSKCCLTIL 1480
Score = 29.1 bits (62), Expect = 3.5
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Frame = +2
Query: 140 ENCPNSDLCSENEIYVKCVQA---QCGPMTCSEKDLPMP--------CPLVRREYCKARC 286
E CP C +N V+C+ + C P C +P+ CP V +E CK C
Sbjct: 1184 EGCPEQ--CCQNGCPVECLSSCKPHCPPRCCFTVLIPIADNQSVKEKCPAVCKETCKPEC 1241
Query: 287 VCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPPRTCNSLIARIK 442
LKD G CP C +C CPP C +++ I+
Sbjct: 1242 PL-SCCLKDARG-------CPA-TC------VEDCKPGCPPECCFAVLKPIQ 1278
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/84 (25%), Positives = 28/84 (33%)
Frame = +2
Query: 191 CVQAQCGPMTCSEKDLPMPCPLVRREYCKARCVCKQGYLKDDSGKCVARENCPN*ECSGE 370
C CG +TC+ + CP E C C G K V C + C
Sbjct: 267 CKSRWCG-VTCTGSGCDVKCPNNGTESCDQTCQKSAGDCKMRCDAKVCTSKCTDGRCQAI 325
Query: 371 NEEFSNCTNPCPPRTCNSLIARIK 442
+ CT C + C S+ K
Sbjct: 326 SCGGDRCTQEC-GKNCTSMACTAK 348
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/110 (24%), Positives = 42/110 (38%)
Frame = +2
Query: 89 VCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRRE 268
VC +G + + + +C LC +N+ C + +C TC+++ L C V
Sbjct: 40 VCIDGNCTFNCSRNMGYGSC--DQLCLQNKDQKPCPRLKCAASTCNQRCLSGGCTDVA-- 95
Query: 269 YCKARCVCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPPRTC 418
C + C Q C + NC N EC + CT C C
Sbjct: 96 -CNSH-TCLQ--------TCTS--NCTNMECHSN----TKCTQECEDGAC 129
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Frame = +2
Query: 185 VKCVQAQCGPMTCSEKDLPMPCPLVRREYCKARCV--CKQGYLKDDSGKCVARENCPN*E 358
V C + QC +D C L A C CK G + +C +
Sbjct: 146 VGCKRMQCASAESCNQDCTRGCQLDCSNENTADCTQECKTGSCSFNCAAQTCESSCAHGS 205
Query: 359 CSGENEEFSNCTNPCPPRTCNSLI 430
C +NCT C + C ++
Sbjct: 206 CPNMTCGGTNCTQKC-GKDCQQVV 228
>SB_47465| Best HMM Match : EGF_CA (HMM E-Value=2.4e-08)
Length = 263
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCS 226
C CK+G++++ G CV + C +CSE + KC+ G C+
Sbjct: 138 CECKKGFVREPEG-CVDIDECVYPRVCSE---HAKCINTH-GSYLCT 179
>SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 31.1 bits (67), Expect = 0.87
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Frame = +2
Query: 86 CVCKEGYLKDDSG---KCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCPL 256
C C G++ D G KC+ C N CSE+ +C G S + C
Sbjct: 31 CSCHVGWIGKDCGTESKCLPINPCQNGGTCSESLGTYRC-NCMSGWQGLSCEVGCGSCH- 88
Query: 257 VRREYCKA-RCVCKQGYLKD 313
YC +CVC GY+ D
Sbjct: 89 -PNAYCMMDKCVCNPGYIGD 107
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/81 (27%), Positives = 31/81 (38%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRR 265
C C GY D CV+ P + + AQCGP+ C E+ + C + +
Sbjct: 391 CRCNHGYRGDGVTYCVSTTVRPQTTTSPPTTSRPQ--GAQCGPVRCHERGV---CIVYQG 445
Query: 266 EYCKARCVCKQGYLKDDSGKC 328
+ C C GY D C
Sbjct: 446 ---RQECRCNHGYRGDGVTYC 463
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 281 RCVCKQGYLKDDSGKCVARENCPN*EC 361
RCVC GYL D KC A C +C
Sbjct: 1223 RCVCNPGYL-GDGRKCTADGTCEGVKC 1248
>SB_55808| Best HMM Match : Pentaxin (HMM E-Value=1.2e-08)
Length = 574
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 407 ADMGSCSWKTLHFRLNIPNLGSFLGRHIYRYRLSDIPVYTRIWL 276
A++ C W FR P G+ LG H+Y Y D P TRI L
Sbjct: 71 AELTICVW----FRTR-PQAGNVLGGHLYFYHTGDHPDQTRIAL 109
>SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)
Length = 309
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Frame = +2
Query: 86 CVCKEGYLKDDSG-KCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCP--L 256
C C EG+ D +G KC N L + Y C E P C +
Sbjct: 127 CNCPEGFTPDVTGLKCTGILPFRNMLLNPYYDCYGSSPVFMCYFEDMDECGTPGYCDHGM 186
Query: 257 VRREYCKARCVCKQGY-LKDDSGKCVARENC 346
+ CVC QGY L D+ CV C
Sbjct: 187 CKNMNGSFSCVCNQGYHLTDNKRTCVDMNEC 217
>SB_33921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +2
Query: 74 CKAGCVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTC-SEKDLPMPC 250
C C+C E G C + C + +E + V + QC +TC S P P
Sbjct: 290 CSERCLCTEEGRLACIGLCPPPQTCSPQERKTERMVLVPGSECQCREITCISRVTTPQPT 349
Query: 251 PLVRRE 268
+ +E
Sbjct: 350 TVPTKE 355
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 92 CKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKD 235
C EG G+ +NC LC+E E + C+ P TCS ++
Sbjct: 272 CSEGNRTYTIGEIFVTDNCSERCLCTE-EGRLACIGLCPPPQTCSPQE 318
>SB_31768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 92 CKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMP---CPL 256
C E + +G+ + + P CS + V C C P+ CSE+ + MP CP+
Sbjct: 330 CVENGERYFNGEVWSPSHDPICTTCSCKDATVSCFPVVCLPLNCSEQLIMMPERCCPV 387
>SB_24750| Best HMM Match : Rad10 (HMM E-Value=5.1)
Length = 576
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -1
Query: 210 PHCAWTHFTYISFSEQRSEFGQFSRATHLPLSSFRYPSL---HTHPAL 76
P WT FT +S S+ S +RA + LS YP + H +P L
Sbjct: 355 PDLLWTFFTSLSLSDLLSRGSTLTRADYARLSRAGYPPITDRHGNPPL 402
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 17/90 (18%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKC-------VARENCPNSDLCSENE--IYVKCVQAQCGP-MTCSEKD 235
C C EGY ++ GKC + +C + LC+ + +C++ G TC + D
Sbjct: 27 CQCAEGYERNSQGKCADVNECKTGKHDCSVNALCTNTDGTFICRCLRGYIGDGKTCIDFD 86
Query: 236 ---LPMPCPLVRREYCKA----RCVCKQGY 304
LP V E + C+CK G+
Sbjct: 87 ECKLPKNDCDVNAECINSIGSYSCICKPGF 116
>SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 122 GKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCS 226
G+ V RE+ P + C +IY Q+ CG +T S
Sbjct: 260 GRLVPRESAPANHACCGTDIYDVTTQSCCGNITLS 294
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 29.5 bits (63), Expect = 2.7
Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 19/130 (14%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGP----MTCSEKDLPM--- 244
C C EGY G+CV C S+ SE++ + P T +E +
Sbjct: 295 CTCFEGYHLTSDGQCVDINECSCSNQTSEDDT-ASSGGSMASPGFNLTTSNETETSSGES 353
Query: 245 --PCPLVRREYCKARCV---------CKQGY-LKDDSGKCVARENCPN*ECSGENEEFSN 388
C V + +C +C+ C +G L +D CV + C +G N N
Sbjct: 354 VDGCYSVVQRFCSHQCLNTPGSFICTCPEGLALSEDGKSCVDVDEC----STGANVCNDN 409
Query: 389 CTNPCPPRTC 418
C N TC
Sbjct: 410 CVNLYGKYTC 419
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 471 CTCKPDYLKLDDNSACVKICEC 536
C+C P ++ DN C+ I EC
Sbjct: 732 CSCNPGFVLASDNFGCLDINEC 753
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 101 GYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRREYCKA 280
GY +SG + P S C +++ +C Q + C+E L + CP + +YC+
Sbjct: 1746 GYTNTNSGAAANSTDIPESRTCFDHD---EC--TQYSQVQCNEDWLKINCP-KKCKYCRP 1799
Query: 281 RCVCKQGYLKDDSGKC--VARENCPN 352
C +D S C + ENC N
Sbjct: 1800 VC-------EDTSADCNRYSIENCDN 1818
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 101 GYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRREYCKA 280
GY +SG + P S C +++ +C Q + C+E L + CP + +YC+
Sbjct: 70 GYTNTNSGAAANSTDIPESRTCFDHD---EC--TQYSQVQCNEDWLKINCP-KKCKYCRP 123
Query: 281 RCVCKQGYLKDDSGKC--VARENCPN 352
C +D S C + ENC N
Sbjct: 124 VC-------EDTSADCNRYSIENCDN 142
>SB_52240| Best HMM Match : DUF1700 (HMM E-Value=4.1)
Length = 254
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 456 PCEEGCTCKPDYLKLDDNSACVK 524
PC EG +C+PD L DD +C +
Sbjct: 83 PCSEGYSCRPD-LNKDDTYSCTR 104
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 254 LVRREYCKARCVCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNC 391
+ +E CK CK GY+KD G C +C G +F C
Sbjct: 992 MCEKEKCKPM-QCKSGYVKDVCGCCDVCAKTVTQKCGGYWGQFGTC 1036
>SB_20348| Best HMM Match : Planc_extracel (HMM E-Value=5.4)
Length = 148
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -3
Query: 199 LDTFHVYFIFRAEVRIWAVFSGDTFTAIVFQISLFTYASGFAVLLPHQWVGH 44
LDTF + + + +IW+ + T ++F +L Y +GF L W H
Sbjct: 38 LDTFENFVKTKTQGQIWSASAAIAITLVIFLTAL--YYAGFFGLCVSAWARH 87
>SB_53284| Best HMM Match : DUF1279 (HMM E-Value=1.5)
Length = 427
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 98 LYIRIRLCSTLASPMGRA*VSPCTEHVIGPR 6
L + +R +LASP GR V P HV+ PR
Sbjct: 329 LCVHLRRGGSLASPPGRHAVDPWISHVLHPR 359
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 59 VRQEYCKAGCVCKEGYLKDDSGKCVARENCPNSDLCSENEIYVKCVQAQCGP 214
VR++ + GC C EG+ ++ G CV + P LCS CV P
Sbjct: 3564 VRRQNVRKGCPCAEGFC-ENGGTCV--DGTPPYCLCSPGWTGPTCVLIVTAP 3612
>SB_14512| Best HMM Match : IncA (HMM E-Value=0.12)
Length = 642
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 98 LYIRIRLCSTLASPMGRA*VSPCTEHVIGPR 6
L + +R +LASP GR V P HV+ PR
Sbjct: 329 LCVHLRRGGSLASPPGRHAVDPWISHVLHPR 359
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Frame = +2
Query: 86 CVCKEGYLKDDSGKCVARENCPNSDLCSENEI--YVKCVQAQCGPMTCSEKDL--PMPCP 253
C C GY + + C N+ +C + + KC + GP C D+ PC
Sbjct: 186 CACDAGYTGKNCENFCSPNPCKNNGVCVSRGVGYHCKCKRDFKGP-HCEMVDMCDMNPCK 244
Query: 254 ---LVRREYCKARCVCKQGYL--KDDSGKCV 331
V E +CVC G++ D CV
Sbjct: 245 NGRCVADEKAGYKCVCHSGFVGKNCDENYCV 275
>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
Length = 351
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 284 CVCKQGYLKDDSGKCVARENCPN*E--CSGENEEFSNCTNPCPPR 412
C C+ K GKCV N E C+ ++E+S C N C R
Sbjct: 72 CACRSAEFKCPDGKCVHPSKFCNGESDCTDGSDEWS-CDNSCSSR 115
>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
Length = 147
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 284 CVCKQGYLKDDSGKCVARENCPN*E--CSGENEEFSNCTNPCPPR 412
C C+ K GKCV N E C+ ++E+S C N C R
Sbjct: 72 CACRSAEFKCPDGKCVHPSKFCNGESDCTDGSDEWS-CDNSCSSR 115
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 125 KCVARE-NCPNSDLCSENEIYVKCVQAQCGPMT 220
KC+A C D C +N + C +A C P T
Sbjct: 598 KCIAATWKCDGEDDCGDNSDEINCPKATCNPDT 630
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +3
Query: 330 SPEKTAQIRNVQAKMKSFPTARTHVRRVLAIHSSLVLNSKPKPCEEGCTCKPDYLKLDDN 509
S K ++ + +A ++F R + + + KPKP + KPD+LKL N
Sbjct: 1969 SSRKKSEDKPQEAVYENFAAIRRFQQECHEKANETAVKEKPKPKKPPIPKKPDFLKLKQN 2028
Query: 510 SACVKICECPQMASSPDCPKL 572
E P + S+ D K+
Sbjct: 2029 PR----NEIPLIGSNADNTKM 2045
>SB_33986| Best HMM Match : EGF_CA (HMM E-Value=3.5e-17)
Length = 85
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 471 CTCKPDYLKLDDNSACVKICECPQMASSPDCP 566
C C+P + LDD C + EC S CP
Sbjct: 24 CICRPGFYLLDDERTCEDLDEC--SLPSTKCP 53
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.7 bits (61), Expect = 4.6
Identities = 43/192 (22%), Positives = 69/192 (35%), Gaps = 6/192 (3%)
Frame = +3
Query: 3 TAWPNDVLSTRTYLCP-THW*GKSTAKPDAYVKRDI*KTIAVNVSPEKTAQILTSALKMK 179
TA P+ ++ +T P T ++TA PDA V + V+PE TA + T+
Sbjct: 1439 TAAPDITVAPKTTAAPVTTLAPETTAAPDATVAPETKMAPETTVAPETTAALETTVAP-- 1496
Query: 180 YT*NVSKHSAAQ*RAQRRTYLCPAHW*G-ESTAKPDACVNRDI*KTIAVNVSPEKTAQIR 356
AA+ A T L P E+TA P+ V + V PE T +
Sbjct: 1497 -----ESTLAAETTAVPETTLTPGTTVAQETTAAPETTVAPETTVAPETTVVPETTVALE 1551
Query: 357 NVQAKMKSFPTARTHV-RRVLAIHSSLVLNSKPKP---CEEGCTCKPDYLKLDDNSACVK 524
A + T +A ++ + P T PD + D + +
Sbjct: 1552 TTMAPETTVAAESTDAPDTTVAAETTASAETTVAPETTAAPDTTLVPDTTLVPDTTVAAE 1611
Query: 525 ICECPQMASSPD 560
P+ +P+
Sbjct: 1612 TTAAPETTVAPE 1623
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 471 CTCKPDYLKLDDNSACVKICECPQMASSP 557
CTC P Y +DD+ +C + + Q P
Sbjct: 600 CTCNPGYRLMDDDKSCEVLSDLAQGGVMP 628
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 28.3 bits (60), Expect = 6.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 471 CTCKPDYLKLDDNSACVKICEC 536
C C+ Y+ +DN C+ + EC
Sbjct: 292 CQCRQGYVLANDNKTCINLNEC 313
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 281 RCVCKQGYLKDDSGKCVARENCPN*EC 361
RCVC +GY + K V R C N C
Sbjct: 491 RCVCPKGYAGINCDKLVLRNPCHNHPC 517
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 281 RCVCKQGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPPRTCN 421
+C C GY+ + + +NC N CSG NC + CN
Sbjct: 2642 KCECFVGYIGKECENVSSVDNCGNQTCSGR----GNCISQVSSYLCN 2684
>SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09)
Length = 133
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 74 CKAGCVCKEGYLKDDSGKCVARENC 148
C GC C EG ++ D GKCV C
Sbjct: 88 CVDGCFCPEGKIQ-DRGKCVDPGQC 111
>SB_43564| Best HMM Match : zf-C2H2 (HMM E-Value=1.2)
Length = 474
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 345 AQIRNVQAKMKSFPTARTHVRRVLAIHSSLVLNSKPKPCEE--GCTCKPDYLKLDDNSAC 518
A +R+++ ++ + +++ IH S+ L++ P +E GC C + +L DN
Sbjct: 55 ASVRSLKDNLRHL---KQYIKSDYKIHCSIALSALSDPKKECFGCKCHHTHDQLCDNCET 111
Query: 519 VKIC 530
+K C
Sbjct: 112 LKSC 115
>SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 471 CTCKPDYLKLDDNSACVKICECPQMASSPDCPK 569
CTCKP Y D C I EC SP C K
Sbjct: 189 CTCKPGY--TGDRKTCNDIDECAISGDSP-CDK 218
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 86 CVCKEGY-LKDDSGKCVARENCPNSDLC 166
C C+ GY L D+ +C+ + C N + C
Sbjct: 296 CQCRAGYHLHSDNKQCIDDDECSNPNRC 323
>SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3)
Length = 227
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 12/97 (12%)
Frame = +2
Query: 125 KCVARENCPNSDLCSENE--IYVKCVQA----QCGPMTCSEKDLPMPCPLVRRE------ 268
KC+ + N + N IY C Q C +TCS ++ C + E
Sbjct: 31 KCIQQCNGTKCECTGRNRDAIYTGCTQLCGRHPCNTLTCSTENCIQSCHGCKMECDRSVG 90
Query: 269 YCKARCVCKQGYLKDDSGKCVARENCPN*ECSGENEE 379
+C RC+ Q + + +C +C EC E E
Sbjct: 91 FCSQRCLSGQCTIACAAKRCSL--DCRKGECRREKTE 125
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Frame = +2
Query: 65 QEYCKAGCVCKEGYLKDDSGKCVARENCPNSDL----CSENEIYVKCVQAQCGPMTCSEK 232
++ C G C EG K + C + CP C + +QC C +K
Sbjct: 2414 KDECDPGFFCPEGQNKSNPYPCPVGKYCPRGSPSPKDCVAGTFAENAMASQC--QICPQK 2471
Query: 233 DLPMPCPLVRREYCKARCVCKQGY 304
+P ++ + +C +G+
Sbjct: 2472 YYCVPEKVIPGNVASTKTLCPEGW 2495
>SB_23087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 149 GSFLGRHIYRYRLS-DIPLYIRIRLCSTLASPMGRA*VSPCTEHVIGPR 6
GS+ R + +R D L + +LASP GR V P HV+ PR
Sbjct: 321 GSYAMRSVRTWRGGMDRALCVHFCRGGSLASPPGRHAVDPRVSHVLHPR 369
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 113 DDSGKCVARENCPNSDLCSENEIYVKCVQ 199
D + C +CPN+ +C ++ Y +CV+
Sbjct: 943 DRADSCQKDRDCPNNFMCCDSGCYKQCVK 971
>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 450 PKPCEEGCTCKPDYLKLDDNSACVKICECPQMASSPDC 563
P PC+ G +CK L LD N C CP + DC
Sbjct: 595 PNPCKNGASCKD--LHLDYN------CSCPVGFTGKDC 624
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,561,881
Number of Sequences: 59808
Number of extensions: 487438
Number of successful extensions: 1883
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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