Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30664
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.8  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 129 GFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 239
           GF+++     KIV +S +     GH +  L+G  IFN
Sbjct: 114 GFLLILTPNGKIVFVSHTVEHLLGHLQTDLMGQSIFN 150


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 61  VCLRCHPLLC 32
           +C+RCH  LC
Sbjct: 234 ICMRCHDQLC 243


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 646 PPLYYYSFFKLNLYTIL 596
           PP   Y  F L LYT+L
Sbjct: 117 PPRICYYHFTLELYTVL 133


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 646 PPLYYYSFFKLNLYTIL 596
           PP   Y  F L LYT+L
Sbjct: 117 PPRICYYHFTLELYTVL 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,563
Number of Sequences: 336
Number of extensions: 4278
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)