Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30664
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...   185   3e-47
Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...   184   8e-47
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    31   0.92 
Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    29   4.9  
Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score =  185 bits (451), Expect = 3e-47
 Identities = 89/155 (57%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +3

Query: 48  HRRHTLRDRNSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGI 227
           H         SGA+ATFP QCSALRKN  VM++GRPCKIVEMSTSKTGKHGHAKVH+V I
Sbjct: 40  HDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAI 99

Query: 228 DIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDL 404
           DIF  KK EDICPSTHNMDVP VKR +Y L  I +DG+ +LM  ++ +L++DLK+P+GDL
Sbjct: 100 DIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGDL 158

Query: 405 GTQLRTDFDSGK-ELLCTVLKSCGEECVIAVKANT 506
           G  +R   +  +  +L  V+ +CGEE ++  K +T
Sbjct: 159 GNTIREALEKDEGSVLVQVVAACGEEAILGYKIST 193


>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score =  184 bits (447), Expect = 8e-47
 Identities = 89/146 (60%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
 Frame = +3

Query: 75  NSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 254
           +SGA+ATFP QCSALRKN  VM+KGRPCKIVEMSTSKTGKHGHAKVH+V IDIF  KK E
Sbjct: 15  DSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLE 74

Query: 255 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLGTQLRTDFD 431
           DICPSTHNMDVP VKR +Y L  I DDGY +LM  ++ + ++DLK+PD +LG Q+R  ++
Sbjct: 75  DICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTELGQQIRDAYE 133

Query: 432 SGK-ELLCTVLKSCGEECVIAVKANT 506
             +  +L  V+ + GEE ++  K +T
Sbjct: 134 KDEGSVLVQVVSAIGEEAILGWKVST 159


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +3

Query: 276 NMDVPHVKREDYQLTDI--SDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD-FDSGKEL 446
           N  +P +K++ Y L     ++ GY+  +   GDL+   KI D      LR D ++ G+  
Sbjct: 573 NKFIPFIKKKLYILDSFPRANSGYIARVP--GDLKNGKKIEDISKA-MLRPDGYERGRLR 629

Query: 447 LCTVLKSCGEEC 482
              ++K CG++C
Sbjct: 630 HAALVKECGDKC 641


>Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical
           protein F32D8.2 protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +3

Query: 231 IFNGKKYEDICPSTHNMDVPHVKREDYQLT------DISDDGYLTLMADN-GDLREDLK 386
           IF   + ED+   T +    H+ R + ++       D+S DGYLTL + N  DL  D++
Sbjct: 74  IFFPNEDEDVFGLTPDKSKQHIVRGECKINELNEKVDLSSDGYLTLRSKNTNDLPSDIR 132


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +1

Query: 358  TMVTCVRTSKSRMVTSAHSCVLTSTAARNCCAP---C*NPAVRSASSPSK 498
            T++TC  T+  + +  ++SC         CC     C NP   +   P+K
Sbjct: 1822 TLLTCDPTTVCQQLNMSNSCQTVEPGVSGCCCDTDGCLNPLTNTYPGPAK 1871


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +1

Query: 358  TMVTCVRTSKSRMVTSAHSCVLTSTAARNCCAP---C*NPAVRSASSPSK 498
            T++TC  T+  + +  ++SC         CC     C NP   +   P+K
Sbjct: 1822 TLLTCDPTTVCQQLNMSNSCQTVEPGVSGCCCDTDGCLNPLTNTYPGPAK 1871


>Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical
           protein R11A8.8 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 336 GYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLC 452
           GYL      GD ++++K+ +G    Q+ +D D  K   C
Sbjct: 251 GYLPQQPKKGDKKKNIKLKEGRTEHQIVSDIDPAKLRAC 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,042,871
Number of Sequences: 27780
Number of extensions: 403566
Number of successful extensions: 1097
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)