Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30662
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    25   0.44 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    25   0.44 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    25   0.44 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 456 SKYTLYRPDNGK 491
           + +T+YRPDNGK
Sbjct: 28  TSWTIYRPDNGK 39


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 456 SKYTLYRPDNGK 491
           + +T+YRPDNGK
Sbjct: 29  ASWTIYRPDNGK 40


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 456 SKYTLYRPDNGK 491
           + +T+YRPDNGK
Sbjct: 29  ASWTIYRPDNGK 40


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 285 FYTVFAVTQCIDARVFVIICLRHFKYSLSFVTRIHIK 395
           F+TVF V QC      V++    F      +T+I +K
Sbjct: 172 FFTVFNVAQCYLTTELVLMLQTRFVILNKQLTKITVK 208


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 429 EKKKEIKTRFSF*YEF 382
           + KKE KTR  F Y F
Sbjct: 43  KSKKEFKTRTYFIYAF 58


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 429 EKKKEIKTRFSF*YEF 382
           + KKE KTR  F Y F
Sbjct: 276 KSKKEFKTRTYFIYAF 291


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 429 EKKKEIKTRFSF*YEF 382
           + KKE KTR  F Y F
Sbjct: 276 KSKKEFKTRTYFIYAF 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,619
Number of Sequences: 336
Number of extensions: 1631
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)