BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30662 (562 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 29 3.4 02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482... 28 5.9 06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991 27 7.7 >01_02_0022 + 10290033-10290407,10290497-10290848,10290923-10291070, 10291145-10291225,10291651-10291822,10292120-10292158, 10292384-10292543,10292676-10292779,10292979-10293278 Length = 576 Score = 28.7 bits (61), Expect = 3.4 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -1 Query: 61 SPSCILDSTIRSGCSQRRRR 2 SP CILDS ++ C++R RR Sbjct: 192 SPLCILDSLVKFDCAERFRR 211 >02_05_0077 + 25645730-25645993,25647172-25647648,25648027-25648237, 25648407-25648564,25648641-25648711,25648829-25648934, 25649008-25649094,25649701-25650252,25650337-25650403, 25650971-25651104,25651175-25651228,25651376-25651472, 25652007-25652212,25652287-25652367,25652543-25652608, 25653025-25653098,25653766-25653871 Length = 936 Score = 27.9 bits (59), Expect = 5.9 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -1 Query: 133 HSPDHRIHDHHSPDRY 86 HS DHR+ +H+P RY Sbjct: 645 HSEDHRVLQNHAPSRY 660 >06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991 Length = 276 Score = 27.5 bits (58), Expect = 7.7 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Frame = -1 Query: 139 DRHSPDHRI-HDHHSPDR-YGILRTSRRSPS 53 D HS DHR H HH P Y RR+PS Sbjct: 125 DHHSSDHRHGHGHHPPHAGYNCGGGGRRAPS 155 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,956,645 Number of Sequences: 37544 Number of extensions: 166600 Number of successful extensions: 540 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 534 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 540 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1281410928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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