Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30662
         (562 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021287-1|AAX33435.1|  826|Drosophila melanogaster RE31991p pro...    29   5.7  
AY118641-1|AAM50010.1|  678|Drosophila melanogaster SD02507p pro...    29   5.7  
AE014134-2952|AAF53685.2|  826|Drosophila melanogaster CG31790-P...    29   5.7  

>BT021287-1|AAX33435.1|  826|Drosophila melanogaster RE31991p
           protein.
          Length = 826

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 142 CDRHSPDHRIHDHHSPDR 89
           CD  +P H  H HHSPD+
Sbjct: 444 CDHEAPHHH-HHHHSPDK 460


>AY118641-1|AAM50010.1|  678|Drosophila melanogaster SD02507p
           protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 142 CDRHSPDHRIHDHHSPDR 89
           CD  +P H  H HHSPD+
Sbjct: 296 CDHEAPHHH-HHHHSPDK 312


>AE014134-2952|AAF53685.2|  826|Drosophila melanogaster CG31790-PA
           protein.
          Length = 826

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 142 CDRHSPDHRIHDHHSPDR 89
           CD  +P H  H HHSPD+
Sbjct: 444 CDHEAPHHH-HHHHSPDK 460


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,039,623
Number of Sequences: 53049
Number of extensions: 274537
Number of successful extensions: 1000
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)