Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30660
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   1.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   3.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.5  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 201 DQRKC**NEKYRARCTYCRDWRSVQEG 281
           +++ C  +++ R RC YCR  + +  G
Sbjct: 124 EEKNCIIDKRQRNRCQYCRYQKCLNMG 150


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = +1

Query: 121 YSLPVNSSAADVTAELTSDGYL-----VVTAPISENVDKTKNTERVVPIVETGAPYKKDE 285
           Y  P  +   D +A + ++G +       T P  E V K  +  + V  V  G  Y+K  
Sbjct: 147 YGKPEQNYEVDESASVMTNGRIHGIQPSPTLPSKEEVSKKIDDNQKVGYVVEGRNYRKYR 206

Query: 286 PVEKTT 303
             E+T+
Sbjct: 207 VEERTS 212


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 93  VMVVFFSFLRSLDEDKVSLYFNFKVVFLVV 4
           +++  F+ LR +  +   +YF +   FL+V
Sbjct: 302 ILIQLFNSLRQMKNNLERIYFYWSFGFLIV 331


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 93  VMVVFFSFLRSLDEDKVSLYFNFKVVFLVV 4
           +++  F+ LR +  +   +YF +   FL+V
Sbjct: 302 ILIQLFNSLRQMKNNLERIYFYWSFGFLIV 331


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -2

Query: 93  VMVVFFSFLRSLDEDKVSLYFNFKVVFLVV 4
           +++  F+ LR +  +   +YF +   FL++
Sbjct: 302 ILIQLFNSLRQMKNNLERIYFYWSFGFLII 331


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 202 ISENVDKTKNTERVVPIVETGAPYKKD 282
           I E V   +  +RVV  V+  A Y+K+
Sbjct: 164 IVETVYDPREDDRVVCYVQAAARYRKE 190


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 1   KDYKKDNLKVKVKGDFIFVQGSQEAKE 81
           KD+K +N  +KV+   + +   Q+  E
Sbjct: 744 KDFKPNNPDIKVEDGTLTINNIQKTNE 770


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 5/15 (33%), Positives = 8/15 (53%)
 Frame = +1

Query: 487 YTHLMISVFNKIFFC 531
           Y   ++  FN +F C
Sbjct: 438 YAQFIVGTFNSVFIC 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,768
Number of Sequences: 336
Number of extensions: 1681
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)