Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30658
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.3  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 678 CREEVMHSDLKGGTTFYIIKLPLGPHVS 595
           CR E + SD K    +Y+ +  L  H+S
Sbjct: 560 CRSEGIFSDPKNCAAYYVCRSGLSYHLS 587


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 280 WHGNRTRYFPQVTSYAPKLTRN 215
           WH   ++ FP V+   P+L +N
Sbjct: 274 WHLTDSQSFPLVSQRVPQLAKN 295


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory
          receptor candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 10 RSVPQKFTYLQTLSCIA*IFFLYEI*GIF 96
          R  P KF    T +C+  +  L +I G+F
Sbjct: 13 RGTPPKFELPTTHNCLKKVLLLSQIVGVF 41


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 236
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 236
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 553 GDFPYQVGH 527
           GD+PY+ GH
Sbjct: 69  GDYPYENGH 77


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 236
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 322 YHHH*SMHNVVACPWHGNRTRYFPQVTSY 236
           YH+H + ++ V    +G    Y PQ+ S+
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSH 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,908
Number of Sequences: 336
Number of extensions: 2916
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)