Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30657
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.42 
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    25   1.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.1  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   9.1  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 10/50 (20%), Positives = 27/50 (54%)
 Frame = -2

Query: 356  IAANLQTTEKDEVKTGDKESDKIETSGIVENVKREDTYEVKTDDKKSNKI 207
            +AAN++   +DEV    + + + E +  VEN   ++   ++ ++++   +
Sbjct: 1321 VAANVENQREDEVAANVENAKENEVAANVENQNEDEVQPMEVEEERDEGV 1370


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = -2

Query: 473 TQSLEYTTSTTQDIISPRDEANFSVGKNEK-----IDSDEQMIGIAANLQTTEKDEVKTG 309
           T    Y   T +D+I P D     + + E+     I + ++ + +A + Q T+ D  +  
Sbjct: 296 TYPARYANMTLEDVIRPNDGLRVIISEVERQLQRIIAAIDEGVVVAPSGQRTQLDNFRGI 355

Query: 308 DKESDKIETSGIVEN 264
           D   + +E+S I  N
Sbjct: 356 DILGNIVESSSISVN 370


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 240 FVCVFTFHILYNTRSFDFIRFFIACFN 320
           FV +FT  +L    S  F  +F++ FN
Sbjct: 524 FVALFTMEMLLKMYSLGFQGYFVSLFN 550


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 377 NRFSHFSQLKNW 412
           N+ SHF+ LK W
Sbjct: 362 NKMSHFNSLKQW 373


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 377 NRFSHFSQLKNW 412
           N+ SHF+ LK W
Sbjct: 363 NKMSHFNSLKQW 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,692
Number of Sequences: 2352
Number of extensions: 12230
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)