Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30655
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    29   0.039
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    29   0.039
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    29   0.039
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    29   0.039
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.83 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 75  NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 179
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 75  NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 179
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 75  NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 179
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 75  NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 179
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 396 WGVNSTSGNDNFFSYIYSNITPTFV*QNSTDYVGT 292
           W  N    N +  +Y   N  PT+  Q   DY+ +
Sbjct: 286 WTANGHGHNTSSHNYYAQNYAPTYYGQMQPDYLNS 320


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 159 NSNLAVTVAVGQVLQS*FYCSLDYQIFDFVHIIVRSYTEI 40
           NS   V + V   + S  Y +LDY     V I+  S TE+
Sbjct: 476 NSLPTVALEVAGNISSLRYLNLDYNDLSAVPIVTHSLTEL 515


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 656  GSVVFSKAITLCGLVSIKSPVLCKKYSMKVEIILGKVVAF 537
            G ++F++ I +C L+  K  V      M  +I L +VV +
Sbjct: 1164 GCIIFTEGIWICSLIHRKKIVKFLDGIMAFDIQLKQVVNY 1203


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 154 GVMKSFTTTKGGTRFSTARAFLSPIKDRKNLH 249
           G+      ++  TRF T   F + IK   NLH
Sbjct: 206 GIQALINDSRKVTRFPTELTFCNKIKHLVNLH 237


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 712 RSWREILSSGTACQKQESSGRLCF 641
           R+W  +L +  +C K + + R C+
Sbjct: 92  RTWTRLLKNLESCAKIKKTKRYCY 115


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 313 VLLNKGGRDIAVNVRKEVVVSAGAI 387
           ++LNK   +I++  RK+VV+  G +
Sbjct: 271 LVLNKHIDNISLRARKQVVLMLGTV 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,800
Number of Sequences: 336
Number of extensions: 3659
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)