Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30655
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical pr... 31 0.84
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 31 0.84
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 31 0.84
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 29 2.6
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 29 4.5
Z81537-6|CAB04378.1| 106|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical p... 28 7.8
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 7.8
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 7.8
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 102 bits (245), Expect = 2e-22
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Frame = +1
Query: 22 YHSKGGYLSVASDDNMHEIEDLIIKAAVELGLKNLTDCNGDSQIGVMKSFTTTKGGTRFS 201
Y G L V D + + + E L D NG+ Q G+ T G R+S
Sbjct: 175 YRGNNGPLYVKKGDAENPLHKAWLNVGKEHPLGWTNDMNGEKQEGISTMDMTIHNGERWS 234
Query: 202 TARAFLSPIKDRKNLHVIKNAIATKIVFKPGTNIVSGV----LLNKGGRDIAVNVRKE-- 363
++A++ PI++R NL T+++F TN G+ LN G D + +E
Sbjct: 235 ASKAYVHPIRNRPNLITSSGITCTRVLFD--TNKAIGIEFIRKLNFVGTDSIDSYSREKI 292
Query: 364 -----VVVSAGAINSPQLLLLSGIGPRKHLEDLNIEVKADLP-VGENLQDHL--FVPVFY 519
V+++ GAIN+PQLL+LSG+GP HL I + A+LP VG+NLQDHL +V
Sbjct: 293 YCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANLPGVGQNLQDHLEIYVQQES 352
Query: 520 TKP---GDKKATTLP-NIISTFIEYFLHNTGDLIDTSPHRVIAFENTTDPNSPASDMQYH 687
T+P +K + P N+I +E+F + TG + S H +D D+Q+H
Sbjct: 353 TQPVTLYNKSSWKFPHNMIKIGLEWFTNRTG--LGASSHLETGGFARSDDTVTHPDIQFH 410
Query: 688 YL 693
+L
Sbjct: 411 FL 412
>U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical
protein B0252.3a protein.
Length = 297
Score = 31.1 bits (67), Expect = 0.84
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = -1
Query: 608 IKSPVLCKKYSMKVEIILGKVVAFLS-PGLV*KTGTNKWSCKFSPTGKSALTSMFRSSKC 432
I SP+ KY KV I ++A LS G+V + W F GK A++ F S
Sbjct: 148 IFSPIFMNKYGRKVLISGTHIIAGLSFLGIV--LSSEAWHIHFWLLGKFAISCSFMSIYM 205
Query: 431 LRGPI--PESNNSCGELIAPAETTTSFLTFTAISRPPLFNKTPLTMLVPGLKTILVAIA 261
I + N C I ET + F + P L + T + L P + L+A++
Sbjct: 206 FASEIFPTDGRNKC---IGFCETLS---RFGGMLSPYLSHLTAVHALAPAITLSLIAVS 258
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 31.1 bits (67), Expect = 0.84
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = -1
Query: 608 IKSPVLCKKYSMKVEIILGKVVAFLS-PGLV*KTGTNKWSCKFSPTGKSALTSMFRSSKC 432
I SP+ KY KV I ++A LS G+V + W F GK A++ F S
Sbjct: 315 IFSPIFMNKYGRKVLISGTHIIAGLSFLGIV--LSSEAWHIHFWLLGKFAISCSFMSIYM 372
Query: 431 LRGPI--PESNNSCGELIAPAETTTSFLTFTAISRPPLFNKTPLTMLVPGLKTILVAIA 261
I + N C I ET + F + P L + T + L P + L+A++
Sbjct: 373 FASEIFPTDGRNKC---IGFCETLS---RFGGMLSPYLSHLTAVHALAPAITLSLIAVS 425
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 31.1 bits (67), Expect = 0.84
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = -1
Query: 608 IKSPVLCKKYSMKVEIILGKVVAFLS-PGLV*KTGTNKWSCKFSPTGKSALTSMFRSSKC 432
I SP+ KY KV I ++A LS G+V + W F GK A++ F S
Sbjct: 335 IFSPIFMNKYGRKVLISGTHIIAGLSFLGIV--LSSEAWHIHFWLLGKFAISCSFMSIYM 392
Query: 431 LRGPI--PESNNSCGELIAPAETTTSFLTFTAISRPPLFNKTPLTMLVPGLKTILVAIA 261
I + N C I ET + F + P L + T + L P + L+A++
Sbjct: 393 FASEIFPTDGRNKC---IGFCETLS---RFGGMLSPYLSHLTAVHALAPAITLSLIAVS 445
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 253 IKNAIATKIVFKPGTNIVSGVLLNKGGRDIAVNVRKEVVVSAGAINSP----QLLLLSGI 420
I+ +I + V N ++ VLL K +D+ + ++ + + N Q +L++G+
Sbjct: 181 IRPSIGSSSVTTRVPNTLARVLLKKELKDVLIQRKQRLEATEIEANQRHYKVQKMLITGL 240
Query: 421 GPRKHLEDLNIEVKADLP 474
P K +D+ VK DLP
Sbjct: 241 LPEKPEDDIPNIVKCDLP 258
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 253 IKNAIATKIVFKPGTNIVSGVLLNKGGRDIAVNVRKEVVVSAGAINSP----QLLLLSGI 420
I+ +I + V N ++ VLL K +D+ + ++ + + N Q +L++G+
Sbjct: 181 IRPSIGSSSVTTRVPNTLARVLLKKELKDVLIQRKQRLEATEIEANQRHYKVQKMLITGL 240
Query: 421 GPRKHLEDLNIEVKADLP 474
P K +D+ VK DLP
Sbjct: 241 LPEKPEDDIPNIVKCDLP 258
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 196 FSTARAFLSPIKDRKNLHVIKNAIATKIVFKPGTNIVSGVLLNKGGRDIAVNVRKEVVVS 375
FST F SP + KN V K + +TK+V G IV+ + N G + V V ++ +
Sbjct: 176 FSTVIRFSSPTEPGKNATVRKTSTSTKLV--DGKKIVTKTVEN--GDEHIVEVHEDGELK 231
Query: 376 AGAINSP 396
+ +P
Sbjct: 232 CRTVTTP 238
>Z81537-6|CAB04378.1| 106|Caenorhabditis elegans Hypothetical
protein F41D3.7 protein.
Length = 106
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 364 VVVSAGAINSPQLLLLSGIGPRKHLEDLNIEVKADLPVGENLQD 495
+ +S G +N+ L LL GI + + + EVKADL + + D
Sbjct: 46 IEMSEGRMNNATLKLLEGIDVTEAVTTVTSEVKADLKIAIVVDD 89
>Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical
protein W02A2.5 protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 381 TSGNDNFFSYIY--SNITPTFV*QNSTDYVGTGLKNDFSGDSV 259
T + +F Y Y +N+ P FV + T+ +G+ L N F SV
Sbjct: 100 TDTRNEYFEYSYPVTNVQPVFVARKKTETLGSVLWNAFKPFSV 142
>Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical
protein F26D2.13 protein.
Length = 247
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 494 SCKFSPTGKSALTSMFRSSKCLRGPIPESNNSCGELIAPAETTTSFLT 351
+C P+ S L S S IP+S++SC A T +F T
Sbjct: 185 TCSRCPSSTSTLISSTAISSSCTSYIPDSSSSCASWAANGFCTNNFYT 232
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 475 VGENLQDHLFVPVFYTKPGDKKATTLPNIISTF 573
+G+ L D+ FVPV +PGD ++ I TF
Sbjct: 326 LGQTLSDYGFVPVATYRPGDPISSHFEYITPTF 358
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 475 VGENLQDHLFVPVFYTKPGDKKATTLPNIISTF 573
+G+ L D+ FVPV +PGD ++ I TF
Sbjct: 228 LGQTLSDYGFVPVATYRPGDPISSHFEYITPTF 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,121,400
Number of Sequences: 27780
Number of extensions: 345198
Number of successful extensions: 970
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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