Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30654
(697 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory pro... 31 0.009
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 24 1.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 4.2
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 21 7.3
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 9.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.6
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 9.6
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 21 9.6
>DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory
protein 7 protein.
Length = 127
Score = 31.1 bits (67), Expect = 0.009
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 418 KERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDT 543
KE ++ +RH K+ D E L+ K+ P+ Q +YE V T
Sbjct: 82 KETAEKVIRHLTQKRARDWERLSKKYDPQGQYKKRYEEHVAT 123
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 447 QSSQEGSRPRSAHRQAPAQNS 509
QSS+ RPRS+ + AP + +
Sbjct: 232 QSSESSLRPRSSQKSAPGKRT 252
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/19 (36%), Positives = 17/19 (89%)
Frame = +1
Query: 52 KKQRDIEEKRQRLEEAEKK 108
K ++++EE++++ EEA++K
Sbjct: 1068 KTKKELEEEKKQAEEAKRK 1086
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 220 KTKEQLEEEKK 252
KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/19 (36%), Positives = 17/19 (89%)
Frame = +1
Query: 52 KKQRDIEEKRQRLEEAEKK 108
K ++++EE++++ EEA++K
Sbjct: 1068 KTKKELEEEKKQAEEAKRK 1086
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 220 KTKEQLEEEKK 252
KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/19 (36%), Positives = 17/19 (89%)
Frame = +1
Query: 52 KKQRDIEEKRQRLEEAEKK 108
K ++++EE++++ EEA++K
Sbjct: 1068 KTKKELEEEKKQAEEAKRK 1086
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 220 KTKEQLEEEKK 252
KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/19 (36%), Positives = 17/19 (89%)
Frame = +1
Query: 52 KKQRDIEEKRQRLEEAEKK 108
K ++++EE++++ EEA++K
Sbjct: 1068 KTKKELEEEKKQAEEAKRK 1086
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 220 KTKEQLEEEKK 252
KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 484 TGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGR 651
TG+ K + S ++ D D K+ +++ + K + A+QFGGR
Sbjct: 500 TGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPEWLGSKSYGGSADQFGGR 555
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 21.4 bits (43), Expect = 7.3
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 285 HRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKE--TGLRLKRAQRK 425
H+ + + +TP L + ++ RD++ S E E + LRL Q K
Sbjct: 112 HKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQVK 160
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 390 ETGLRLKRAQRKTKAATEAQSSQE 461
E G+ LKR QR+++ A E
Sbjct: 211 EPGIPLKRKQRRSRTTFTAHQLDE 234
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 334 RVPGPSVGVC 305
++PGPSV VC
Sbjct: 104 KMPGPSVEVC 113
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 388 KRQDYDLKELKERQKQQLRHKA 453
K++ +KEL E++KQ KA
Sbjct: 279 KKEIQAIKELNEQEKQAQAQKA 300
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 388 KRQDYDLKELKERQKQQLRHKA 453
K++ +KEL E++KQ KA
Sbjct: 61 KKEIQAIKELNEQEKQAQAQKA 82
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.311 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,240
Number of Sequences: 336
Number of extensions: 2108
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -