Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30654
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    26   0.30 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   1.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.4  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 22/86 (25%), Positives = 34/86 (39%)
 Frame = +1

Query: 55  KQRDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 234
           KQ  +EE RQR  +A    + ++ A   A       T+QK +    L        +  + 
Sbjct: 48  KQSVLEEARQRANDAGLTEEEVVLAKTIAECPESENTVQKAALVLRLREGIGSLARILKT 107

Query: 235 LEEEKKISLSIRIKPLTIEGLSVDKL 312
           +E  K     +  +P   EGL  D L
Sbjct: 108 IENFKGTVTHVESRPSKKEGLQFDVL 133


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 24/119 (20%), Positives = 50/119 (42%)
 Frame = +1

Query: 82  QRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISL 261
           +R E   +   A    M D  +T       KKS+    ++ +LE+N+        +K+ +
Sbjct: 14  ERREREAEHGYASTMPMPDDMRTVTKRPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLKV 73

Query: 262 SIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQ 438
            + + P T    ++  L  KA+   + + + E +    +E+  R+   L+   E+   Q
Sbjct: 74  LVPLGPETSRHTTLG-LLTKAKRFIKSLEERERKHAVHKEQLSREQRFLRRRLEQLTNQ 131


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 100 EKKRQAMLQAMKDASKTGPNFTIQKKSE 183
           EKKRQA L  + +A + G   T ++  E
Sbjct: 313 EKKRQAFLDLLIEAGQNGVLLTDKEVKE 340


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 67  IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFG 192
           I  + +R++  EK    +L  + +AS   PN  +     NFG
Sbjct: 327 INTRGERIQLTEKNGIDVLGNIMEASILSPNQNVYGDLHNFG 368


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/45 (22%), Positives = 19/45 (42%)
 Frame = +3

Query: 438  TEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILRRQKETV 572
            + AQS  + ++    H Q     S+ +Q      H++L   +  V
Sbjct: 905  SSAQSLLQSNQQHFPHHQIQVSTSAGLQTIRLSGHSVLHSAQSVV 949


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.130    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,911
Number of Sequences: 438
Number of extensions: 2467
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)