Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30652
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   0.75 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   0.75 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   0.75 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   0.99 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   5.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   5.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   6.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    19   9.2  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 0.75
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 75  YHHVPRYRRQDAEGDHRPR 19
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 0.75
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 75  YHHVPRYRRQDAEGDHRPR 19
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 0.75
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 75  YHHVPRYRRQDAEGDHRPR 19
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 0.99
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 125 DVDIRKDLYANTVMSGGTTMYPGI 54
           D D+ KD     V+ GG+T  P I
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKI 173


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 112 RMSTSHFMMELYTV 153
           R+   HF +ELYTV
Sbjct: 119 RICYYHFTLELYTV 132


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 112 RMSTSHFMMELYTV 153
           R+   HF +ELYTV
Sbjct: 119 RICYYHFTLELYTV 132


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 97  AYRSLRMSTSHFMMEL 144
           AYR L +  SH M +L
Sbjct: 258 AYRDLWVDLSHMMQQL 273


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 97  AYRSLRMSTSHFMMEL 144
           AYR L +  SH M +L
Sbjct: 258 AYRDLWVDLSHMMQQL 273


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 27  RPRALDHQ 4
           RPRA DHQ
Sbjct: 317 RPRATDHQ 324


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 109 LRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 201
           L M TSHF+  + ++ +M    I     W R
Sbjct: 238 LLMFTSHFIFIVVSIFYMSAYLISNPIMWDR 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,308
Number of Sequences: 336
Number of extensions: 1501
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)