Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30652
(313 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 2e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-47
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 4e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 182 4e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 5e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 2e-46
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 162 5e-41
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 4e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 88 2e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 60 4e-10
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 44 2e-05
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.001
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 36 0.005
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.062
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 29 1.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 2.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 27 4.1
SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42) 26 5.4
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 26 7.2
SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8) 26 7.2
SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_9716| Best HMM Match : HMG_box (HMM E-Value=0.0041) 25 9.5
SB_28847| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88) 25 9.5
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 184 bits (447), Expect = 2e-47
Identities = 84/91 (92%), Positives = 88/91 (96%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYA
Sbjct: 199 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 258
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
NTV+SGGTTMYPGIADRMQKEI+ALAP T+K
Sbjct: 259 NTVLSGGTTMYPGIADRMQKEISALAPPTMK 289
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (446), Expect = 2e-47
Identities = 84/91 (92%), Positives = 88/91 (96%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
+EKSYELPDGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYA
Sbjct: 210 IEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYA 269
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
NTVMSGGTTMYPG+ADRMQKEI+ALAPST+K
Sbjct: 270 NTVMSGGTTMYPGLADRMQKEISALAPSTMK 300
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 182 bits (444), Expect = 4e-47
Identities = 83/91 (91%), Positives = 88/91 (96%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYA
Sbjct: 237 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
NTV+SGG+TMYPGIADRMQKEIT+LAP T+K
Sbjct: 297 NTVLSGGSTMYPGIADRMQKEITSLAPPTMK 327
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 182 bits (444), Expect = 4e-47
Identities = 83/91 (91%), Positives = 88/91 (96%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYA
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
NTV+SGG+TMYPGIADRMQKEIT+LAP T+K
Sbjct: 296 NTVLSGGSTMYPGIADRMQKEITSLAPPTMK 326
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (443), Expect = 5e-47
Identities = 83/91 (91%), Positives = 88/91 (96%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYA
Sbjct: 237 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 296
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
NTV+SGG+TMYPGIADRMQKEI+ALAP T+K
Sbjct: 297 NTVLSGGSTMYPGIADRMQKEISALAPPTMK 327
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 180 bits (439), Expect = 2e-46
Identities = 82/91 (90%), Positives = 88/91 (96%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
LEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYA
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYA 295
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
NTV+SGG+TM+PGIADRMQKEI+ALAP T+K
Sbjct: 296 NTVLSGGSTMFPGIADRMQKEISALAPPTMK 326
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 162 bits (394), Expect = 5e-41
Identities = 72/93 (77%), Positives = 85/93 (91%)
Frame = -3
Query: 281 PPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDL 102
P LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIRKDL
Sbjct: 8 PILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDL 67
Query: 101 YANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
Y+N V+SGG+TM+PGIADRMQKEI LA +++K
Sbjct: 68 YSNCVLSGGSTMFPGIADRMQKEIAMLANASMK 100
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 96.3 bits (229), Expect = 4e-21
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
L + Y LPDG+V+ + ERF PEALFQP + +E G+ E ++N+I D+D R + Y
Sbjct: 240 LVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK 299
Query: 95 NTVMSGGTTMYPGIADRMQKEITAL 21
+ V+SGG+TMYPG+ R+++EI L
Sbjct: 300 HIVLSGGSTMYPGLPSRLEREIKQL 324
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 87.8 bits (208), Expect = 2e-18
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = -3
Query: 296 ELGTGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVD 117
E T E Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+++ SI KCD+D
Sbjct: 2274 EAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDID 2333
Query: 116 IRKDLYANTVMSG 78
+R +L+ N V+SG
Sbjct: 2334 LRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 60.1 bits (139), Expect = 4e-10
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 63
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 62 PGIADRMQKEITALAPSTIK 3
R+Q++I + +K
Sbjct: 256 RDFGRRLQRDIKRTVDARLK 275
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 44.4 bits (100), Expect = 2e-05
Identities = 16/59 (27%), Positives = 35/59 (59%)
Frame = -3
Query: 179 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMR 204
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -3
Query: 173 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPS 12
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQS 107
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -3
Query: 161 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 57
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFL 180
T L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 863 TNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.062
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3
Query: 209 PEALFQPSFLGMESCGIHETV 147
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 165 RHPRDRVQLHHEVRRRHP*GPVRQH--RHVRWYHHVPRYRRQDAE 37
R P+DR + HH RRRH R+H H R H ++ DA+
Sbjct: 830 RPPQDRHRRHHH-RRRHHNNKHRKHSREHSRRRHQRKHHKGNDAQ 873
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 189 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 16
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 15 LDHQ 4
H+
Sbjct: 954 RKHE 957
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAP 15
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -2
Query: 210 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 31
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 30 HRPRALDHQ 4
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -2
Query: 135 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 37
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -2
Query: 204 GSLPAFLP-GYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDA 40
G++ +LP GI + + + H R+H P R HR+ R + +P RY R+ A
Sbjct: 185 GNMQRYLPESIGIPGNMQRYLTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHA 244
Query: 39 E 37
+
Sbjct: 245 K 245
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 165 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 37
+H + Q+H R+ H P R HR+ R + +P RY R+ A+
Sbjct: 438 KHAKIPTQIHRYTRK-HAKIPTRIHRYTRKHAKIPTQIHRYTRKHAK 483
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -2
Query: 159 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALD 10
PRDR + E RRR P R+ R + Y PR RR+ R R D
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRD 901
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = -2
Query: 177 YGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDH 28
Y +++PR R HH +H + H H +HH + Q H
Sbjct: 247 YHKLKNPRHRYHHHHHHHHQH--NHHQHHHHHHHHHHNHHHHHQQHHHHH 294
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 138 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQ 46
HH R RH +HRH +HH Y R+
Sbjct: 324 HHHQRHRHR----HRHRHRHHHHHHHEYNRR 350
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 162 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHH 67
H R HH +RH +HRH +HH
Sbjct: 314 HHRHHHHHHHHHHQRHRHRHRHRHRHHHHHHH 345
>SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42)
Length = 355
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Frame = +3
Query: 105 VLTDVDV--ALHDG----VVHGLVDAARFHTQEGRLEESLG 209
+ TD ++ ALHD +V GLV ++H QEG S+G
Sbjct: 218 IYTDDEIWSALHDAKVGPLVSGLVGKLKYHIQEGGANFSVG 258
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 234 HR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GP 103
HR P++ LPA + PR R + + R RHP P
Sbjct: 859 HRINRSPVADDYLPALRHRSSVSPDPRGRPPISPDYRGRHPISP 902
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 138 HHEVRRRHP*GPVRQHRHVRWYHH 67
H + R+H R HRH + HH
Sbjct: 89 HRHIHRQHHHQHYRHHRHQHYRHH 112
>SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8)
Length = 625
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 171 IVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRR 49
IV P R + +E+R P G R+H H + P+ R+
Sbjct: 516 IVVDPTRRHSIPNEIRPLEPRGECRRHTHHHKHKVAPKKRK 556
>SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 177 YGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP 61
Y I+RH RD V L H GP+ + R+ H P
Sbjct: 588 YYILRHVRDVVGLDSTPLVMHADGPLPPNTLCRYAHRTP 626
>SB_9716| Best HMM Match : HMG_box (HMM E-Value=0.0041)
Length = 169
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 132 EVRRRHP*GPVRQHRHVRWYHHVPRYRRQ 46
E+ + HP QH H +HH RYRR+
Sbjct: 48 EITQAHPGKDNSQHHH--HHHHRHRYRRR 74
>SB_28847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 170 IPYPGRKAGREP 205
IP+PG KAG EP
Sbjct: 188 IPFPGSKAGHEP 199
>SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 180 GYGIVRHPRDRVQ-LHHEVRRRHP*GP-VRQHRHVRW 76
G G R+P R Q + +V +R P P R+HR +W
Sbjct: 184 GMGPSRYPHPRSQRVREDVLQRRPRPPQTRRHRDKKW 220
>SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88)
Length = 634
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 58 PGYMVVPPDMTVLAYRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMV 237
P Y + T+ + S ST+ + L +W PH + E +R S R+ L ++
Sbjct: 116 PWYNQTLGNDTMTSNMSFANSTNPYGDGLIYNNWTPHSFLTHFENLRRKSSDRHSLLKLI 175
Query: 238 I 240
+
Sbjct: 176 L 176
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,892,372
Number of Sequences: 59808
Number of extensions: 204215
Number of successful extensions: 760
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 387973711
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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