Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30652
(313 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 190 3e-51
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 22 1.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 2.0
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 2.0
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 2.0
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 2.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 3.5
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 4.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 4.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 4.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 8.0
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 20 8.0
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 190 bits (464), Expect = 3e-51
Identities = 87/91 (95%), Positives = 90/91 (98%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
LEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YNSIMKCDVDIRKDLYA
Sbjct: 11 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 70
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
NTV+SGGTTMYPGIADRMQKEITALAPST+K
Sbjct: 71 NTVLSGGTTMYPGIADRMQKEITALAPSTMK 101
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 112 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 201
R F+ L T W+ +++I RK W R
Sbjct: 18 RSENDPFLKRLITGDEKWVVYNNIKRKRSWSR 49
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 2.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 248 RQEARRTSRGGARYPIRP 301
RQ+ R +RYP+RP
Sbjct: 110 RQDIETIIRRNSRYPLRP 127
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 2.0
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 112 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 201
R F+ L T W+ +++I RK W R
Sbjct: 139 RNENDPFLKRLITGDEKWVVYNNIKRKRSWSR 170
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 2.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 144 QLHHEVRRRHP*GPVRQHRH 85
Q+HH++ +HP +Q +H
Sbjct: 167 QMHHQMHTQHPHMQPQQGQH 186
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 2.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 144 QLHHEVRRRHP*GPVRQHR 88
QL+ +V+ H PV+QHR
Sbjct: 266 QLNSDVQPGHGSPPVKQHR 284
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.0 bits (42), Expect = 3.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 129 LHDGVVHGLVDAARFHTQEG 188
+H G +H V ++ TQ+G
Sbjct: 907 VHQGQIHLTVAVVQYKTQDG 926
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 4.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 312 RLTIGRIGYRAPPREVL 262
R T G++ YR +EVL
Sbjct: 20 RCTQGKVNYREKEKEVL 36
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 4.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 312 RLTIGRIGYRAPPREVL 262
R T G++ YR +EVL
Sbjct: 20 RCTQGKVNYREKEKEVL 36
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.6 bits (41), Expect = 4.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 143 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIT 27
N +K D DI++ Y + V MYP + M+K I+
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAIS 379
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 8.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -3
Query: 194 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 99
+ +FLG+ + YN + D + KDL+
Sbjct: 328 ETTFLGLIRLIVLNLSYNMLTHIDARMFKDLF 359
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 19.8 bits (39), Expect = 8.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 102 QVLTDVDVALHDGVVH 149
Q+L V H+GVVH
Sbjct: 17 QILESVHHCHHNGVVH 32
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,474
Number of Sequences: 438
Number of extensions: 1778
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6595479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -