Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30652
(313 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 170 2e-43
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 168 6e-43
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 168 6e-43
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 167 1e-42
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 167 1e-42
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 167 1e-42
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 164 1e-41
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 161 7e-41
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 161 7e-41
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 159 5e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 144 1e-35
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 125 5e-30
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 94 2e-20
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 77 3e-15
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 76 4e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 67 3e-12
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 58 9e-10
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 53 4e-08
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 48 1e-06
At5g43500.2 68418.m05318 expressed protein 30 0.28
At5g43500.1 68418.m05319 expressed protein 30 0.28
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 1.5
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 2.0
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 27 2.6
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 27 2.6
At2g06010.1 68415.m00657 expressed protein 27 2.6
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 3.5
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 3.5
At4g10290.1 68417.m01692 hypothetical protein 27 3.5
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 26 4.6
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 26 4.6
At2g16990.1 68415.m01959 expressed protein 26 4.6
At4g32280.1 68417.m04592 auxin-responsive AUX/IAA family protein... 26 6.1
At4g06603.1 68417.m01028 expressed protein 26 6.1
At3g60030.1 68416.m06704 squamosa promoter-binding protein-like ... 26 6.1
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 26 6.1
At5g24180.1 68418.m02845 lipase class 3-related 25 8.1
At3g60930.1 68416.m06816 expressed protein 25 8.1
At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a) ide... 25 8.1
At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a) ide... 25 8.1
At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a) ide... 25 8.1
At3g54700.1 68416.m06052 phosphate transporter, putative strong ... 25 8.1
At3g06520.1 68416.m00756 agenet domain-containing protein contai... 25 8.1
At1g43580.1 68414.m05003 expressed protein 25 8.1
At1g34590.1 68414.m04299 hypothetical protein 25 8.1
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 170 bits (413), Expect = 2e-43
Identities = 77/95 (81%), Positives = 84/95 (88%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EKSYELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 168 bits (409), Expect = 6e-43
Identities = 75/95 (78%), Positives = 85/95 (89%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 168 bits (409), Expect = 6e-43
Identities = 75/95 (78%), Positives = 85/95 (89%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 167 bits (407), Expect = 1e-42
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+ GIADRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMK 328
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 167 bits (407), Expect = 1e-42
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+ GIADRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMK 328
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 167 bits (407), Expect = 1e-42
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+ GIADRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMK 328
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 164 bits (399), Expect = 1e-41
Identities = 74/91 (81%), Positives = 83/91 (91%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
+EK+YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY
Sbjct: 238 VEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
N V+SGG+TM+PGIADRM KEITALAPS++K
Sbjct: 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMK 328
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 161 bits (392), Expect = 7e-41
Identities = 74/95 (77%), Positives = 82/95 (86%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+ GI DRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMK 328
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 161 bits (392), Expect = 7e-41
Identities = 74/95 (77%), Positives = 82/95 (86%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T +EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 293
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+ GI DRM KEITALAPS++K
Sbjct: 294 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMK 328
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 159 bits (385), Expect = 5e-40
Identities = 71/95 (74%), Positives = 81/95 (85%)
Frame = -3
Query: 287 TGPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 108
T ++++YELPDGQVITIG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDIRK
Sbjct: 235 TSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRK 294
Query: 107 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
DLY N V+SGGTTM+PGIADRM KEI ALAP ++K
Sbjct: 295 DLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMK 329
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 144 bits (348), Expect = 1e-35
Identities = 64/91 (70%), Positives = 76/91 (83%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
++++YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DIRKDLY
Sbjct: 190 IDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYG 249
Query: 95 NTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
N V+SGGTTM+ GI +RM KEI ALA + ++
Sbjct: 250 NIVLSGGTTMFRGIEERMTKEINALAAANMR 280
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 125 bits (302), Expect = 5e-30
Identities = 57/94 (60%), Positives = 70/94 (74%)
Frame = -3
Query: 284 GPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 105
G ++K+Y LPDGQ ITI ERF CPE LFQPS +G ES GIHE NSI+KC VD R+D
Sbjct: 224 GWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRD 283
Query: 104 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
+Y N +M+GGTTM GI +RM KE+ AL PS++K
Sbjct: 284 MYGNILMTGGTTMLHGIKERMTKELNALVPSSMK 317
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 93.9 bits (223), Expect = 2e-20
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 275 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 96
L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + V+ I + D+D R LY
Sbjct: 237 LVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQ 296
Query: 95 NTVMSGGTTMYPGIADRMQKEI 30
+ V+SGG+TMYPG+ R++KEI
Sbjct: 297 HIVLSGGSTMYPGLPSRLEKEI 318
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 77.0 bits (181), Expect = 3e-15
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = -3
Query: 269 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 90
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I + + L NT
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENT 280
Query: 89 VMSGGTTMYPGIADRMQKEI----TALAPSTIK 3
V+ GGTT G R QKE +A+ P+ +K
Sbjct: 281 VLCGGTTSMTGFESRFQKEANLCSSAIRPTLVK 313
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 76.2 bits (179), Expect = 4e-15
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 12/100 (12%)
Frame = -3
Query: 266 SYELPDGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCD 123
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ V SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 122 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 3
VDIR++LY++ +++GGT+ + +R++K++ +P + +
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSAR 389
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 66.9 bits (156), Expect = 3e-12
Identities = 28/75 (37%), Positives = 47/75 (62%)
Frame = -3
Query: 239 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 60
I + NERF PE LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 59 GIADRMQKEITALAP 15
+ +R++ E+ L P
Sbjct: 353 QLKERLEGELRPLVP 367
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 58.4 bits (135), Expect = 9e-10
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = -3
Query: 239 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTT 69
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +M+GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 68 MYPGIADRMQKEITALAP 15
+ PG+ +R++ I + P
Sbjct: 649 LLPGMNERLECGIRMIRP 666
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 53.2 bits (122), Expect = 4e-08
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = -3
Query: 272 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-VDIRKD--L 102
+ S E+ T+ ERF+ E LFQP GM + +H+ V + CD + D
Sbjct: 332 QASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSW 391
Query: 101 YANTVMSGGTTMYPGIADRMQKEITALAPSTI 6
+ V++GG+ PG+++R+++E+ PS+I
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSI 423
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.4 bits (110), Expect = 1e-06
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = -3
Query: 233 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 57
+G ERF PE F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 56 IADRMQKEITALAPSTI 6
R+Q+++ + + +
Sbjct: 340 FGRRLQRDLKKIVDARV 356
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 30.3 bits (65), Expect = 0.28
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 173 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 9
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPT 513
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 30.3 bits (65), Expect = 0.28
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 173 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 9
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPT 525
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 201
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 124 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 258
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 272 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 144
+ S E+ T+ ERF+ E LFQP G+ +H+ VY
Sbjct: 332 QASVEVSGEGWFTLSKERFQTGEILFQPRLAGII---VHKLVY 371
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 201
L+ + G+++ D+ +A YR L M Y++ W + + WKR
Sbjct: 496 LTEVEGFVISADDLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKR 549
>At2g06010.1 68415.m00657 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 171 FHTQEGRLEESLGTTEPLVTDGDHL 245
F+ GRLE SL E +VT D+L
Sbjct: 164 FNMSSGRLEASLDRVEAIVTHSDYL 188
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -2
Query: 165 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH 7
RH RD+ + + +HRH + Y D EG+HR R+ H
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKH 724
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -2
Query: 165 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH 7
RH RD+ + + +HRH + Y D EG+HR R+ H
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKH 724
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 109 LRMSTSHFMMELYTVSWMPHDSIPRKEGWK 198
+R ++ + EL SW +S+PRK WK
Sbjct: 23 MRQTSDAKLAELGVTSWQLWESMPRKFPWK 52
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 246 SGDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRR 118
S D+HR LS + +F+ G G+V D V + R+R
Sbjct: 54 SDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSPSRKR 96
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 246 SGDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRR 118
S D+HR LS + +F+ G G+V D V + R+R
Sbjct: 54 SDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSPSRKR 96
>At2g16990.1 68415.m01959 expressed protein
Length = 456
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 10 VEGARAVISFCILSAIPGYMVVP--PDMTVLA 99
+ G R +++ LSA G+MVVP D+TV A
Sbjct: 5 IGGLRHMLATVFLSAFAGFMVVPVITDVTVAA 36
>At4g32280.1 68417.m04592 auxin-responsive AUX/IAA family protein
contains Pfam profile: PF02309: AUX/IAA family
Length = 251
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 93 HRHVRWYHHVPRYRR 49
HRH+R +HH P + R
Sbjct: 113 HRHIRNHHHCPYHHR 127
>At4g06603.1 68417.m01028 expressed protein
Length = 786
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 43 ILSAIPGYMVVPPDMTVLAYRSLRMSTSHFMMELYTVSWMPH 168
+L G ++ PPD T+L R ++SHF+ + +++ M H
Sbjct: 519 LLGGCVGPLLPPPD-TLLESRKYAETSSHFLRAVASMNRMVH 559
>At3g60030.1 68416.m06704 squamosa promoter-binding protein-like 12
(SPL12) identical to squamosa promoter binding
protein-like 12 [Arabidopsis thaliana] GI:6006395;
contains Pfam profiles PF03110: SBP domain, PF00023:
Ankyrin repeat
Length = 927
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 234 GDHLTVRKLVGLLEGGPGTQ 293
G+H+ R LVGLL+GG G Q
Sbjct: 258 GEHIG-RNLVGLLQGGGGLQ 276
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 108 GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALD 10
G QH H+R H PRYR + +P +D
Sbjct: 1400 GACGQHGHMRTNKHCPRYRENT---ESQPEGID 1429
>At5g24180.1 68418.m02845 lipase class 3-related
Length = 375
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +1
Query: 7 MVEGARAVISFCILSAIPGYMVVPPDMTVLAYRSLRMSTSHFMMELYTVSWMPHDSIPRK 186
++ G R +S LS+ P +++ DMTV + + +T+H + + W DS R
Sbjct: 300 LLVGRRGKLSPSDLSSEPLHLLPSADMTVNKNKPTKSTTAHGLHQ-----WWERDSTLR- 353
Query: 187 EGWK 198
E W+
Sbjct: 354 ENWE 357
>At3g60930.1 68416.m06816 expressed protein
Length = 798
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 43 ILSAIPGYMVVPPDMTVLAYRSLRMSTSHFMMELYTVSWMPH 168
+L G ++ PPD T+L R + SHF+ + +++ M H
Sbjct: 531 LLGGCVGPLLPPPD-TLLESRKYAETASHFLRAVASMNRMVH 571
>At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 108 GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH 7
G +QH H ++ PRY+R D G P H
Sbjct: 327 GKQQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGH 360
>At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 108 GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH 7
G +QH H ++ PRY+R D G P H
Sbjct: 327 GKQQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGH 360
>At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 108 GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH 7
G +QH H ++ PRY+R D G P H
Sbjct: 327 GKQQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGH 360
>At3g54700.1 68416.m06052 phosphate transporter, putative strong
similarity to phosphate transporter (AtPT2) [Arabidopsis
thaliana] GI:1502430
Length = 433
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +1
Query: 19 ARAVISFCILSAIPGYMVVPPDMTVLAYRSLRMSTSHFMMELYTVSWMPHDSIPRKE 189
ARA + S +PGY + V+ +++M FM +P+D KE
Sbjct: 239 ARAQTLIALCSTVPGYWFTVAFIDVIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKE 295
>At3g06520.1 68416.m00756 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 466
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 209 PEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 105
PE ++P ++SC E V+N+ M +V++R D
Sbjct: 312 PEECYKPPLKKLKSCERAEKVFNNGM--EVEVRSD 344
>At1g43580.1 68414.m05003 expressed protein
Length = 421
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 114 DVDVALHDGVV----HGLVDAARFHTQEGRLEESLGTTEPLVTDGDHLTVRKLVGLLE 275
D VA++ G++ G + +A T++ +LE+ + DGD TVR+LV +E
Sbjct: 322 DCIVAIYVGILLWKMTGFIWSAERKTKQTKLEKIQNSLIHAAKDGDIETVRRLVEEIE 379
>At1g34590.1 68414.m04299 hypothetical protein
Length = 820
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 28 VISFCILSAIPGYMVVPPDMTVLAYRSLRMSTSHFMMELYTVSWMPH 168
+ S +L G ++ PPD T+L R + SHF+ + +++ M H
Sbjct: 563 IASANLLVGCVGTLLPPPD-TLLESRKYAETASHFLRAVASMNRMVH 608
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,728,945
Number of Sequences: 28952
Number of extensions: 134945
Number of successful extensions: 467
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 331449360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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