Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30640
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.30 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.30 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 204 DQRIC**NEKYRARCTYCRDWRSVQEG--RACIKDDSRNLGRFYDSGAEDINSSGSD 368
           +++ C  +++ R RC YCR  + +  G  R  ++++ +       S  E  +S  SD
Sbjct: 148 EEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVESTSSLHSD 204


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 204 DQRIC**NEKYRARCTYCRDWRSVQEG--RACIKDDSRNLGRFYDSGAEDINSSGSD 368
           +++ C  +++ R RC YCR  + +  G  R  ++++ +       S  E  +S  SD
Sbjct: 148 EEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVESTSSLHSD 204


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = +1

Query: 259 ETGAPYKKDEPV*KTTVETLDVSTTQEPKTSTPAVVTASPEP 384
           E GAP      +  TT  T   +TT     +T      +P P
Sbjct: 650 EPGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPP 691


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 100 FASQFFHTYSLPVNSSAADVTAELTSDGYLVVTAPISEYVD 222
           +   +F++ S   NSS +DV  +   +    +    S+Y+D
Sbjct: 138 YNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLD 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,949
Number of Sequences: 438
Number of extensions: 1474
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)