Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30639
(658 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 434 e-122
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 434 e-122
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 434 e-122
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 429 e-121
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 428 e-120
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 427 e-120
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 424 e-119
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 424 e-119
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 424 e-119
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 395 e-110
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 353 4e-98
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 352 1e-97
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 251 3e-67
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 161 5e-40
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 144 5e-35
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 118 3e-27
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 116 2e-26
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 81 5e-16
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 75 4e-14
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 75 4e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 6e-12
At5g43500.2 68418.m05318 expressed protein 36 0.031
At5g43500.1 68418.m05319 expressed protein 36 0.031
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 29 2.1
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 29 2.7
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 2.7
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 2.7
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 2.7
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 2.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.7
At5g67080.1 68418.m08458 protein kinase family protein contains ... 29 3.6
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 3.6
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 3.6
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 6.3
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 8.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 434 bits (1070), Expect = e-122
Identities = 202/218 (92%), Positives = 212/218 (97%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE L
Sbjct: 226 EQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVL 263
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 434 bits (1069), Expect = e-122
Identities = 201/218 (92%), Positives = 212/218 (97%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPI 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L
Sbjct: 226 EQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVL 263
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 434 bits (1069), Expect = e-122
Identities = 201/218 (92%), Positives = 212/218 (97%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPI 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L
Sbjct: 226 EQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVL 263
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 429 bits (1057), Expect = e-121
Identities = 200/218 (91%), Positives = 211/218 (96%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDF
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDF 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE L
Sbjct: 226 EQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVL 263
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 428 bits (1054), Expect = e-120
Identities = 199/218 (91%), Positives = 211/218 (96%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE L
Sbjct: 226 EQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVL 263
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 427 bits (1053), Expect = e-120
Identities = 201/218 (92%), Positives = 210/218 (96%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIKEKL YVALD+
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE L
Sbjct: 226 EQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVL 263
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 424 bits (1045), Expect = e-119
Identities = 196/218 (89%), Positives = 210/218 (96%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 46 MVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+
Sbjct: 166 PIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE L
Sbjct: 226 EQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVL 263
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 424 bits (1045), Expect = e-119
Identities = 196/218 (89%), Positives = 210/218 (96%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 46 MVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+
Sbjct: 166 PIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE L
Sbjct: 226 EQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVL 263
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 424 bits (1045), Expect = e-119
Identities = 196/218 (89%), Positives = 210/218 (96%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 46 MVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+
Sbjct: 166 PIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDY 225
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE L
Sbjct: 226 EQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVL 263
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 395 bits (972), Expect = e-110
Identities = 175/218 (80%), Positives = 204/218 (93%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGM +KD++VGDEAQ++RGIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+
Sbjct: 47 MVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPI 106
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTV
Sbjct: 107 LLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTV 166
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLCY+A+D+
Sbjct: 167 PIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDY 226
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQEM A S++++++YELPDGQVITIG ERFRCPE L
Sbjct: 227 EQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVL 264
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 353 bits (869), Expect = 4e-98
Identities = 162/218 (74%), Positives = 193/218 (88%)
Frame = +3
Query: 3 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 182
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 183 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 362
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 363 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 542
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDY 177
Query: 543 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EQEM A S++++++YELPDGQVITIG ERFRCPE L
Sbjct: 178 EQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVL 215
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 352 bits (865), Expect = 1e-97
Identities = 159/216 (73%), Positives = 186/216 (86%)
Frame = +3
Query: 9 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 188
G+ +SYVG+E + R ILTLK P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 189 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 368
TEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPV 156
Query: 369 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 548
YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQ
Sbjct: 157 YEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQ 216
Query: 549 EMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
EM +++K+Y LPDGQ ITI ERF CPE L
Sbjct: 217 EMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVL 252
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 251 bits (615), Expect = 3e-67
Identities = 108/212 (50%), Positives = 151/212 (71%)
Frame = +3
Query: 21 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 200
KD VG+ R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 201 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 380
LNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY 170
Query: 381 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 560
+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IKEKLCY++ D+++E
Sbjct: 171 SFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQL 230
Query: 561 AAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
+T L K+Y LPDG+VI +G ERF+ PEAL
Sbjct: 231 GLETTILVKNYTLPDGRVIKVGTERFQAPEAL 262
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 161 bits (390), Expect = 5e-40
Identities = 78/184 (42%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Frame = +3
Query: 24 DSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 194
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 195 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 359
+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 360 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 539
VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE CY D
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSD 246
Query: 540 FEQE 551
+E
Sbjct: 247 IVKE 250
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 144 bits (349), Expect = 5e-35
Identities = 87/240 (36%), Positives = 133/240 (55%), Gaps = 31/240 (12%)
Frame = +3
Query: 30 YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 206
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 207 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 386
+ REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVL 195
Query: 387 PHAILRLDLAGRDLTDYLMKILTERG------YSF-------------------TTTA-- 485
A++ L G LTD L+K L +G YSF TT +
Sbjct: 196 QKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTESYK 255
Query: 486 ---EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 656
+R IV DIK+ +C V + + + T+ SYELPDGQ + IG +RF+ P+ +
Sbjct: 256 LFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---SYELPDGQTLEIGADRFKVPDVM 312
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 118 bits (285), Expect = 3e-27
Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 11/196 (5%)
Frame = +3
Query: 72 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 251
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 252 FNSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 401
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 402 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSL 581
R+DL G+ T+YL ++++ R S E +V D KEKLC+V+LD +++ A +L
Sbjct: 181 RIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTL 238
Query: 582 EKS-YELPDGQVITIG 626
KS Y LPDG T G
Sbjct: 239 IKSTYVLPDGVTHTKG 254
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 116 bits (278), Expect = 2e-26
Identities = 73/193 (37%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Frame = +3
Query: 81 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 257
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 258 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 437
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKL 176
Query: 438 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 617
+ L + S + V +KE+ A E E+A + + LPDGQVI
Sbjct: 177 FAQELGKTNPSMNLSMSD--VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVI 231
Query: 618 TIGNERFRCPEAL 656
+IG ER+ EAL
Sbjct: 232 SIGRERYSVGEAL 244
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 81.4 bits (192), Expect = 5e-16
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Frame = +3
Query: 81 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 257
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 258 SPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 422
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 423 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 554
+TDYL ++L+ + ++ E D+K + CY+A D+ E+
Sbjct: 205 HVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYASEI 248
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 486 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 656
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 74.9 bits (176), Expect = 4e-14
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Frame = +3
Query: 138 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 287
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 288 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 464
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 465 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRC 644
SF + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQT 352
Query: 645 PEAL 656
E L
Sbjct: 353 GEIL 356
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 74.9 bits (176), Expect = 4e-14
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Frame = +3
Query: 138 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 287
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 288 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 464
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 465 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRC 644
SF + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQT 352
Query: 645 PEAL 656
E L
Sbjct: 353 GEIL 356
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 15 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 191
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 192 EAPLNPKANREK 227
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +3
Query: 174 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 353
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 354 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 449
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +3
Query: 174 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 353
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 354 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 449
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +3
Query: 306 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 485
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 486 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 626
IKE + D +Q AA + S+ +LPDG +G
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVG 501
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 29.1 bits (62), Expect = 2.7
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Frame = +3
Query: 171 EHPVLLTEAPLNPKANREKMTQIMFE--TFNSPAM--YVAIQAVLSLYASGRTTGIVLDS 338
+ P ++ + PL+ K + I F+ TF+ P+ + + + SG+T +V S
Sbjct: 344 QRPTIIQD-PLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGS 402
Query: 339 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 518
G G S V + E + P++ ++ L G ++ +K L E+ I E
Sbjct: 403 GSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVNQEPALFATTILEN 460
Query: 519 LCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 626
+ Y D AAAS + S+ LP G +G
Sbjct: 461 ILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVG 498
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 488 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 360
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 233 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 126
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 489 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 584
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 245 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 120
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 39 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 218
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 219 REK 227
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 39 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 218
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 219 REK 227
REK
Sbjct: 225 REK 227
>At5g67080.1 68418.m08458 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 344
Score = 28.7 bits (61), Expect = 3.6
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = +3
Query: 276 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD-LTDYLMKIL 452
A+ V+ SG+T + + + +S + I G +P L GRD L+ +K
Sbjct: 195 ALGCVVVEMFSGKTAWSLKEGSNFMSLLLRIGVGDEVPMIPEELSEQGRDFLSKCFVKDP 254
Query: 453 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE 632
+R + + D+ + DF M T STS +E PD ++ G++
Sbjct: 255 KKRWTAEMLLNHPFVTVDVDHDVLVKEEDFVVNMKTEDVSTSPRCPFEFPDWVSVSSGSQ 314
Query: 633 RFRCPE 650
P+
Sbjct: 315 TIDSPD 320
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 356 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 472
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 356 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 472
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 376 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 200
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 199 GASVSST---GCSSGAT 158
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 245 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 120
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,120,146
Number of Sequences: 28952
Number of extensions: 262178
Number of successful extensions: 931
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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