Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30638
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.8  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +1

Query: 121 CYFIYNYCILLIY*SYFICDLL-CDNNIFYQLYFVTFIDYLRDKQTFNCVYPKIYNIINN 297
           CYFIY + +  IY S     ++     +   + F +   Y    +     + K+ ++++ 
Sbjct: 148 CYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNLLRIIEADFSKLNHLLSG 207

Query: 298 ISNLENYI*IHKRTHYVHNSI 360
             NL+  + I+ +  ++   I
Sbjct: 208 TENLDLVLPIYSQLVFMCKKI 228


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 259 NCVYPKIYNIINNISNLENYI*IHK----RTHYVHNSIEIVMKLIRL*PFYSTIS 411
           N  Y  +YN  NN+++L  Y+ +++        V +S+ +  +   L  +Y T+S
Sbjct: 16  NLSYKVMYNGNNNVTDLVEYVLLNEDNPCARKCVKDSVPMTCRYTFLLEWYHTLS 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,666
Number of Sequences: 336
Number of extensions: 3839
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)