Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30638
(785 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 0.80
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 4.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 4.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 4.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 4.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 4.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 4.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 4.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 4.3
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 4.3
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 4.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.4
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.80
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K HY N IE
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLHYNINYIE 342
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 169 FICDLLCDNNIFYQLYFVTFIDYLRD 246
F+C + + Y+L F DY RD
Sbjct: 26 FVCKDITSTSALYRLKLYLFCDYDRD 51
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 271 PKIYNIINNISNLENYI*IHKRTHYVHNSIE 363
PKI + ++N N NY +K +Y N IE
Sbjct: 301 PKIISSLSNNYNYNNYNNNYKPLYYNINYIE 331
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 610 TNKKVYSPFPPPVYNYINTRLSIKLDKGS 696
TN YSP Y+NT+ +K + G+
Sbjct: 263 TNNLYYSPLSSRSLYYVNTKPFMKSEYGA 291
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.6 bits (46), Expect = 4.3
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 618 FIRISNQIQLFVTVTWTWTYEGPEYII*KKRANMLHHSLRVSTHEYVRR*RASHACAVTT 439
++ +N+I++FV +T++Y P +I + ++ H V HE R +A +
Sbjct: 201 YLTDTNEIRIFVATIFTFSYCIPMILIIYYYSQIVSH---VVNHEKALREQAKKMNVDSL 257
Query: 438 RS 433
RS
Sbjct: 258 RS 259
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 351 MHIMSPFMYLNIIFKIRNVINYI 283
+H+M F YL+ K N+ Y+
Sbjct: 62 VHMMLQFRYLDARLKFSNIAPYL 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,623
Number of Sequences: 438
Number of extensions: 4016
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -