Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30636
(597 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 34 0.004
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 34 0.004
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 31 0.037
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 29 0.11
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 29 0.15
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.35
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 27 0.35
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 27 0.61
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 0.61
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 26 0.80
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 26 0.80
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 1.9
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 1.9
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 25 2.5
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 24 3.2
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 24 4.3
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 5.7
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 5.7
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 23 7.5
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 33.9 bits (74), Expect = 0.004
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 361 EEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLK 522
+E K EE+ QQ+L+E + DE L+ + +Q +E+M+ + +LK
Sbjct: 835 KEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELK 888
Score = 27.1 bits (57), Expect = 0.46
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 177 RAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNR 344
R++K +EE R+ KK Q E L K ++E+ K + ++Q E ++AAL +
Sbjct: 798 RSKKKSEESRKNWKKHEQDFETL---KLEIEELQKGIVTAKEQAVKLEEQIAALQQ 850
Score = 24.2 bits (50), Expect = 3.2
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 108 KLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN--- 278
+L++ + M + + R A ++ EE+ EL KK+ +++ ++ + Q +
Sbjct: 712 QLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV 771
Query: 279 KDLEEK 296
KDL+ K
Sbjct: 772 KDLQAK 777
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 33.9 bits (74), Expect = 0.004
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +3
Query: 150 EQQARDANLRAEKVNEEVRELQKK------LAQVEEDLILNKNKLEQANKDLEEKEKQLT 311
E+ L+ EK+ EE++E+ KK L VE + +N+L+ + DLE +K +
Sbjct: 681 EKHMAQLKLQKEKITEELKEVMKKTRRQGELTTVESQIRGLENRLKYSMNDLETSKKNIN 740
Query: 312 ATEAEVAALNRE 347
+ ++ RE
Sbjct: 741 EYDRQLEDFTRE 752
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 30.7 bits (66), Expect = 0.037
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +3
Query: 84 IKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDL-ILNKN 260
+++ + K + + + E+Q + L+ E NE+++E Q++ + ED +
Sbjct: 71 VRRMLADAKADNETTVGIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAE 130
Query: 261 KLEQANKDLEEKEKQLTATEAEVAALNRESAAD*GRPREI 380
E+ K+ E L T + ES + R +E+
Sbjct: 131 HREELRKEKELFNALLAQTLGGTSGARLESQQELQREQEL 170
Score = 27.5 bits (58), Expect = 0.35
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 343 GKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQL 519
G V+++EE ++ + + ++L EAQ+ A E +V E +++ + +L N L
Sbjct: 87 GIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAEHREELRKEKELFNAL 145
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 29.1 bits (62), Expect = 0.11
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +2
Query: 170 QPPC*EGKRGSPRTPEEARPGGGRPDPE----QEQTGAGQQGP*REGEAADRHRSRGRCP 337
QPP G+ +P PGGGR + + Q G G G E + SR R P
Sbjct: 494 QPPP-GGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNGGGGGGGGGGREGSQEWNSRSRPP 552
Query: 338 QQ 343
QQ
Sbjct: 553 QQ 554
Score = 25.4 bits (53), Expect = 1.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 191 KRGSPRTPEEARPGGGRPDP 250
+ G+P P+ RPGG P P
Sbjct: 202 RTGTPTQPQPPRPGGMYPQP 221
Score = 24.2 bits (50), Expect = 3.2
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 167 RQPPC*EGKRGSPRTPEEARPGGGRPDPEQEQTGAGQQGP*REG 298
R PP + +P + ARP G P Q G GP R G
Sbjct: 163 RPPPI--AHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTG 204
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 28.7 bits (61), Expect = 0.15
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = +3
Query: 78 DAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRA--EKVNEEVRELQKKLAQVEEDLIL 251
D KK + + L++ + + QA+ A + +E V +QK Q+E+DL
Sbjct: 369 DIESKKQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDLQE 428
Query: 252 NK----NKLEQANKDLEEKEKQLTATEAEVAAL 338
+++EQ + +E ++ QL E+A++
Sbjct: 429 RNRDGLSQVEQRKQAVETEKAQLKERNDELASM 461
Score = 25.8 bits (54), Expect = 1.1
Identities = 14/72 (19%), Positives = 29/72 (40%)
Frame = +3
Query: 132 DKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLT 311
D EQ+ + ++ E EL +A + ++ L N + EEK +
Sbjct: 432 DGLSQVEQRKQAVETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKDAREEKHHERC 491
Query: 312 ATEAEVAALNRE 347
A ++E + ++
Sbjct: 492 AKQSETTRIEKQ 503
Score = 25.4 bits (53), Expect = 1.4
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +3
Query: 90 KKMQAMKLEKDNAMDKAD--TCEQQARDANLRAEKVNEE--VRELQKKLAQVEEDLILNK 257
KK+Q L + + + E + + LR E + + +LQK + + + L +
Sbjct: 754 KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813
Query: 258 NKLEQANKDLEEKEKQLTATEAEVAAL 338
++Q + + K+ + A EAE+A +
Sbjct: 814 RTVQQEEQTAQAKKDAMGAVEAEIARI 840
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.5 bits (58), Expect = 0.35
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 99 QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN 278
+ MKLE+++ + E++AR+A A + E+ REL+++ + + + K + E+
Sbjct: 439 ERMKLEEEHRAARLRE-EERAREAREAAIE-REKERELREQREREQRE----KEQREKEQ 492
Query: 279 KDLEEKEKQLTATE-AEVAALNRESAAD*GRPRE 377
++ EE+E+Q E E +E + R RE
Sbjct: 493 REKEERERQQREKEQREREQREKEREREAARERE 526
Score = 22.6 bits (46), Expect = 9.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 306 AASPSLQGPCWPAPVCSCSGSGLPP 232
AA+P+ Q P PAP + S +G+ P
Sbjct: 933 AAAPTQQQPLPPAP-AAASSAGVQP 956
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 27.5 bits (58), Expect = 0.35
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +1
Query: 373 EKSEERSGTAQQKLLEAQQSADE-NNRMCKVLENRAQQDEE--RMD-QLTNQLKE----A 528
E ++R+ + + AD+ N R+ K +NR ++ E R D LTN+ KE A
Sbjct: 1456 ENIKKRANATKNTARDLHHEADQLNGRLAKT-DNRLEEREAQIRKDLNLTNEAKEKVGQA 1514
Query: 529 RLLAEDADGKSDEVSRKLAFV 591
+L + +A + D+ R+++ +
Sbjct: 1515 QLNSNEAKSQVDKAMREVSLI 1535
Score = 24.6 bits (51), Expect = 2.5
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 132 DKADTCEQQARDANLRAEK-VNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQL 308
+K D + A+ + EK +NE +REL+ +L +V++ L E N + +
Sbjct: 1082 EKIDILVEDAKSGSGVGEKTLNEILRELEARLQEVQKLLDNADQSQEVTNHKISKGGYNA 1141
Query: 309 TATEAEVAALNRE 347
T ++ R+
Sbjct: 1142 TLANGKIQDARRQ 1154
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 26.6 bits (56), Expect = 0.61
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 185 EGKRGSPRTPEEARPGGG-RPDPEQEQTGAG--QQGP*REGEAADRHRSRGRCPQQGK 349
E KR + P +++ GGG R E+ + G+G EGE + + + +G Q K
Sbjct: 936 ERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKK 993
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 26.6 bits (56), Expect = 0.61
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 165 DANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNR 344
+AN R E++NEE+ +++ + + +E + +L EE EK A E + ALN+
Sbjct: 14 EANARNERINEELTQMRILMTKQQE--YTERRELIAR----EEMEKMRAAHERDRTALNK 67
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 26.2 bits (55), Expect = 0.80
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 346 KVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLK 522
++Q +EE L + TA+QKL E E + + ++ + Q+ M +Q K
Sbjct: 528 RLQTLEEALPVTRTELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGK 586
Score = 24.6 bits (51), Expect = 2.5
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 388 RSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKE 525
R GT+ Q A + A ++R + ++ RAQ+ + +++ L Q E
Sbjct: 750 RMGTSVQTKTSASEPAGASSREIEQMQIRAQEIQTQINYLQEQQGE 795
Score = 24.2 bits (50), Expect = 3.2
Identities = 23/87 (26%), Positives = 43/87 (49%)
Frame = +3
Query: 87 KKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKL 266
K+K+Q +E A+D++ + A ++ L+ + ++EV E ++KL + +
Sbjct: 466 KEKLQTELIELKRAVDESKSALSIA-ESELKICQ-HDEVTE-RRKLESL-------RYSY 515
Query: 267 EQANKDLEEKEKQLTATEAEVAALNRE 347
E+ KDLEEK +L E + E
Sbjct: 516 EETEKDLEEKRARLQTLEEALPVTRTE 542
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.2 bits (55), Expect = 0.80
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 162 RDANLRAEKVNEEVRELQKKLAQVEEDL--ILNKNKLEQANKDLE----EKEKQLTATEA 323
R++ + EK++E +R ++ +L +EE+ + K ++A + LE E E + T +
Sbjct: 180 RESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQL 239
Query: 324 EVAALNRESAAD 359
E R+S+ D
Sbjct: 240 EELDGQRKSSGD 251
Score = 23.4 bits (48), Expect = 5.7
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +3
Query: 90 KKMQAMKLEKDNAMDKADTCEQQAR--------DANLRAEKVNEEVRELQKKLAQVEEDL 245
K+M+ +++ K D C ++ DA+ + + +EL+K +++
Sbjct: 920 KRMEKWATKENMLRQKIDECTEKIAGLGALPNVDASYQKMSLKSLFKELEKANQHLKKYN 979
Query: 246 ILNKNKLEQANKDLEEKEK 302
+NK L+Q E+KEK
Sbjct: 980 HVNKKALDQFLSFSEQKEK 998
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 25.0 bits (52), Expect = 1.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 340 TGKVQQIEEDLEKSEERSGTAQQKLLEAQQSADE 441
T ++ +EE E+ E+ +++L++A ADE
Sbjct: 293 TDEINSLEEKTERLEDTISKQKRELMDALAKADE 326
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.0 bits (52), Expect = 1.9
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -1
Query: 297 PSLQGPCWPAPVCSCSGSGLPPP--GRASSGVRGLPRLPSQHG 175
P L+GP P G G P P + G+ G+ LP +G
Sbjct: 331 PGLEGPSGPKGDAGVPGYGRPGPQGEKGDIGLTGVNGLPGLNG 373
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.6 bits (51), Expect = 2.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 452 CAKCWRTGH 478
C KCW TGH
Sbjct: 418 CFKCWETGH 426
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 24.2 bits (50), Expect = 3.2
Identities = 13/86 (15%), Positives = 40/86 (46%)
Frame = +3
Query: 48 GP*QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLA 227
GP QQ+ ++ Q + ++ + +QQ + N + E ++ ++ ++
Sbjct: 216 GPQQQEQRQQQ--QQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQRE 273
Query: 228 QVEEDLILNKNKLEQANKDLEEKEKQ 305
Q ++ + +N+ Q + +++++Q
Sbjct: 274 QQQQQRVQQQNQQHQRQQQQQQQQRQ 299
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.8 bits (49), Expect = 4.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 452 CAKCWRTGHS 481
C KCW+ GH+
Sbjct: 277 CYKCWKVGHT 286
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 5.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 505 AGPYAPRPAVPCSPTLCTY 449
A P PR +V C PT C +
Sbjct: 1 ARPQRPRLSVTCRPTKCLH 19
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 5.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 200 SPRTPEEARPGGG 238
SP+ PEEA GGG
Sbjct: 901 SPKDPEEAAVGGG 913
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 23.0 bits (47), Expect = 7.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 452 CAKCWRTGH 478
C KCW+ GH
Sbjct: 330 CFKCWKLGH 338
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,409
Number of Sequences: 2352
Number of extensions: 10710
Number of successful extensions: 72
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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