Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30633
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    31   1.3  
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      31   1.3  
U67954-1|AAB52605.2|  826|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U21324-15|AAA62569.1|  142|Caenorhabditis elegans Hypothetical p...    30   1.8  
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF039710-8|AAB96686.2|  312|Caenorhabditis elegans Hypothetical ...    29   5.4  
AC024801-7|AAK95892.2|  606|Caenorhabditis elegans Hypothetical ...    28   9.4  

>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
            C35C5.1 protein.
          Length = 2962

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 213  KGVLNKGGTNEQIEPEVDKLLREGDRIEEVRENEESPKSQ 332
            +G++ +      ++ +VD++L EG R+E+VRE E   + Q
Sbjct: 1134 RGMIRRREERVALQEKVDRMLEEGLRLEKVREAERIRQQQ 1173


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
            protein C35C5.1 protein.
          Length = 2962

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 213  KGVLNKGGTNEQIEPEVDKLLREGDRIEEVRENEESPKSQ 332
            +G++ +      ++ +VD++L EG R+E+VRE E   + Q
Sbjct: 1134 RGMIRRREERVALQEKVDRMLEEGLRLEKVREAERIRQQQ 1173


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 213  KGVLNKGGTNEQIEPEVDKLLREGDRIEEVRENEESPKSQ 332
            +G++ +      ++ +VD++L EG R+E+VRE E   + Q
Sbjct: 1134 RGMIRRREERVALQEKVDRMLEEGLRLEKVREAERIRQQQ 1173


>U67954-1|AAB52605.2|  826|Caenorhabditis elegans Hypothetical
           protein F41D9.1 protein.
          Length = 826

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 287 VAFAQQLIHFWFDLLISAALVEH 219
           V   +Q IH WFDLL SA   EH
Sbjct: 705 VGVNEQCIHLWFDLLCSATQHEH 727


>U21324-15|AAA62569.1|  142|Caenorhabditis elegans Hypothetical
           protein C35D10.13 protein.
          Length = 142

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +3

Query: 192 KRATLMEK-GVLNKGGTNEQIEPEVDKLLREGDRIEEVRENEESPKSQFVPS--SASPRT 362
           KR TL E+ GVL KG T +  EPE  K   + D    V +   + K +FV +  + +P  
Sbjct: 35  KRITLNERFGVLEKGYTIQATEPETVK--NDSDVFFVVHDRNLNSKKEFVENYLAKNPIV 92

Query: 363 NSTFK 377
           NS  K
Sbjct: 93  NSPEK 97


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 73  PCRTSTWTRCCATPSYPTTQSRPSLNYTTSP 165
           PC T+T T   AT   PTT S  +   TT+P
Sbjct: 444 PCPTTTSTTTSATTLVPTTSSSTTTTTTTTP 474


>AF039710-8|AAB96686.2|  312|Caenorhabditis elegans Hypothetical
           protein C46E10.1 protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +3

Query: 261 VDKLLREGDRIEEVRENEESPKSQFVPSSASPRTNSTF 374
           +D+ L +GD++   +++ E+  S F+ + +SP   STF
Sbjct: 131 LDEFLYKGDKLYASKDDRETLLSGFITNCSSPVDKSTF 168


>AC024801-7|AAK95892.2|  606|Caenorhabditis elegans Hypothetical
           protein Y50D7A.2 protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 213 KGVLN--KGGTNEQIEPEVDKLLREGDRIEEVRENEESPKSQFVP 341
           +GV+N  K   +E+++ E DKL+    R E  R N+E   +  +P
Sbjct: 116 EGVVNRMKSSNSEKLQSEYDKLVEGLKRTERERANDERLANPVLP 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,854,279
Number of Sequences: 27780
Number of extensions: 359090
Number of successful extensions: 1023
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)