Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30630
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.33 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   1.0  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   1.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   5.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.4  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   5.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   7.1  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 13/51 (25%), Positives = 29/51 (56%)
 Frame = +1

Query: 541 YENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGSREIKR 693
           Y N+    + K  + + + +L +++K++   +E  KEKK +  K +RE+ +
Sbjct: 239 YHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAK 289


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +1

Query: 370 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN---SQVNDLRGKFVKPTLKKVSK 540
           +K+VC  YH  +    +E  + E +++     I DL     Q  D R + +    K+V  
Sbjct: 228 VKKVCAGYHASLYPCPNEYNEREEMLRGVRTRIEDLKMVLGQTQDQRQRVLLNVAKEVPN 287

Query: 541 YE 546
           +E
Sbjct: 288 WE 289


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
 Frame = +1

Query: 385  KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKL 564
            +D    ++++E        + ++ DM   +LN+    L     + T +++ +   K   L
Sbjct: 694  RDISAEVSKIEKTAHRFGQLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETL 753

Query: 565  QKKAAEFNFRNQLKVVKKKEFTLEEEDKE--KKPDWSKGSREIKR*KKK 705
            QK   E          K K+   +  D +  ++ +      ++KR KKK
Sbjct: 754  QKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKK 802


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +3

Query: 450  KERYGDLRPELPSQRPQRQIRQAHTKEGF-QIRKQIRQAPEEGRR 581
            +E+ G+ RP +PS  P+   R+A+ +    ++R++ RQ  ++ RR
Sbjct: 1067 EEQCGE-RPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERR 1110


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = +1

Query: 331  GKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKF 510
            G+ +  + A + T K +     +R   L ++   L     R++   S+ NS+  ++  +F
Sbjct: 1149 GRYEARNPAYQRTTKDLFSGNQQRTQELVNQNETLSCYTSRRNSTTSNANSEPQEVAPQF 1208

Query: 511  VKPTLKKVSKY 543
            VK   +  SKY
Sbjct: 1209 VK-FARDSSKY 1218


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 529 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKP 660
           +++  E K  +L++K AE       K  KKKE   ++ED+++ P
Sbjct: 30  RIADEEAKQRELERKRAEGESDFGRKK-KKKEIRYDDEDEDEGP 72


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 471 RPELPSQRPQRQ----IRQAHTKEGFQIRKQIRQAPE 569
           RP+  + RP RQ    +     K  +Q+ KQIR+APE
Sbjct: 235 RPQ--TTRPNRQDIIEVTSFTGKMWYQVYKQIREAPE 269


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 483 PSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQ 587
           P Q+ QRQ +Q H +   Q ++Q +Q  ++ ++ Q
Sbjct: 217 PQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,184
Number of Sequences: 2352
Number of extensions: 8099
Number of successful extensions: 32
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)