Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30630
(706 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g29075.1 68416.m03637 glycine-rich protein 38 0.006
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 37 0.015
At1g56660.1 68414.m06516 expressed protein 35 0.060
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.11
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.11
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 33 0.18
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 32 0.43
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 32 0.43
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 0.56
At3g28770.1 68416.m03591 expressed protein 31 0.56
At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containi... 31 0.74
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.98
At3g26050.1 68416.m03244 expressed protein 31 0.98
At2g15270.1 68415.m01741 expressed protein 31 0.98
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.3
At1g47900.1 68414.m05334 expressed protein 30 1.3
At2g22795.1 68415.m02704 expressed protein 30 1.7
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 1.7
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.3
At3g05110.1 68416.m00555 hypothetical protein 29 2.3
At4g19550.1 68417.m02875 expressed protein 29 3.0
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 29 4.0
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 29 4.0
At5g52550.1 68418.m06525 expressed protein 29 4.0
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 5.2
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 5.2
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 5.2
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 5.2
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 28 6.9
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 28 6.9
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.9
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 9.2
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 9.2
At5g65620.1 68418.m08255 peptidase M3 family protein / thimet ol... 27 9.2
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 27 9.2
At2g31410.1 68415.m03838 expressed protein 27 9.2
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 37.9 bits (84), Expect = 0.006
Identities = 30/118 (25%), Positives = 61/118 (51%)
Frame = +1
Query: 349 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 528
DD ++ K KDY + DEK + K+KD + NS+ ++ + K K K
Sbjct: 140 DDGDDGHKKHSGKDYDDG-----DEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYK 194
Query: 529 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGSREIKR*KK 702
+ ++ + + +KK ++N ++ K KKK + ++++K+KK +++ E K+ K+
Sbjct: 195 EHHD-DDDYDEKKKKKKDYNDDDEKK--KKKHYNDDDDEKKKKHNYNDDDDEKKKKKE 249
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 526 KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGSREIKR*K 699
KK K+ N +KK +N + K KKKE+ ++EDK+KK + E K+ K
Sbjct: 218 KKKKKHYNDDDDEKKKKHNYNDDDDEKK-KKKEYH-DDEDKKKKKHYDNDDDEKKKKK 273
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 397 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 576
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 577 AEFNFRN-QLKVVKKKEFTLEEEDKEKKPD 663
+ R +L+ + K+ L+EE + KK +
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTKKEE 964
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 34.7 bits (76), Expect = 0.060
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Frame = +1
Query: 334 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 513
K + +++ E K+ K+ E +++K D E +K ++S ++ + GK
Sbjct: 122 KHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKE----KKHEDVSQEKEELEEEDGKKN 177
Query: 514 KPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-KKEF----TLEEEDKEKKPDWSK 672
K K S E K K +KK E + N+ K VK KKE LE+ED+EKK + +
Sbjct: 178 KKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDE 237
Query: 673 GSREIK 690
+E+K
Sbjct: 238 TDQEMK 243
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 519
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 520 TLKKVSKYENKF 555
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 519
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 520 TLKKVSKYENKF 555
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 504
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 505 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVKKKEFTLEEEDKEKKPD 663
K LK+ +KF++ QK ++F ++L +++KK L E+ + K D
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 442 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVK 615
+ K+ ++ N ++ D+ GK V + ++ +K QK+ ++ + + ++ K+ K
Sbjct: 153 VEKKASKPETEKNGKMGDIGGKIVAAASRMSERFRSKGNVDQKETSKASKKPKMSSKLTK 212
Query: 616 KKEFTLEEEDKEKKPDWSKGSREIK 690
+K ++ED+E D S E K
Sbjct: 213 RKHTDDQDEDEEAGDDIDTSSEEAK 237
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 31.9 bits (69), Expect = 0.43
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEY-IVKRKDMEI--SDLNSQVNDLRGKF 510
K + +D I+ H A+ + DL++ ++K K + I +D +Q ++G
Sbjct: 102 KKTTEIKKDVIRTTVLKVHIHCAQCDK---DLQHKLLKHKAIHIVKTDTKAQTLTVQGTI 158
Query: 511 VKPTLKK-VSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGSREI 687
L + K +K A++ E + + + KKKE EEDK+KK D K E
Sbjct: 159 ESAKLLAYIKKKVHKHAEIISSKTEEEKKKEEEDKKKKE----EEDKKKKEDEKKKEEEK 214
Query: 688 KR 693
K+
Sbjct: 215 KK 216
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 31.5 bits (68), Expect = 0.56
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +1
Query: 358 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 537
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 538 KYENKFAKLQKKAAE---FNFRNQLKVVKKKEFTLEEEDKEKK 657
+ + F L +K AE N NQ +++++ E ++ K+
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKE 317
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 0.56
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +1
Query: 340 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 516
+N + ED ++ K H ++ + E D+K E K + EI SQ N++ K K
Sbjct: 1126 QNSNKKKEDKNEKK-KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKK 1184
Query: 517 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 657
+ + K E + + ++K + N + +KK+ ++EE K+K+
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLKKNEED-----RKKQTSVEENKKQKE 1226
Score = 28.3 bits (60), Expect = 5.2
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Frame = +1
Query: 334 KPKNIDDANEDTIKRVCKDY-HERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKF 510
K K ++N + K+Y + + + ED K + K E + N + +
Sbjct: 947 KKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSA 1006
Query: 511 VKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGSREIK 690
K KK +YE K +K +++A + ++Q KK+E EE K KK + SR++K
Sbjct: 1007 SKNREKK--EYEEKKSKTKEEAKKEKKKSQ---DKKREEKDSEERKSKKE--KEESRDLK 1059
Query: 691 R*KKK 705
KK+
Sbjct: 1060 AKKKE 1064
>At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1077
Score = 31.1 bits (67), Expect = 0.74
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +1
Query: 424 KFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL 603
+F LE D+ +S L DL +K ++ K A+ Q+ +F Q+
Sbjct: 185 EFQLESTESADDLLLSVLTGLCKDLSPLVIKFDDDQILK-----AQFQECNHILDFLYQM 239
Query: 604 KVVKKKEFTLEEEDKEKKPDWSKGSREIK 690
V + +E LEE+D+E + D + G+R I+
Sbjct: 240 IVPRIEEEELEEDDEENRADENGGNRAIR 268
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 397 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 576
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 577 AEFNFRNQLKVVKK 618
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 448 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 624
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 625 FTLEEEDKEKKPDWSKGS 678
F + E+K KK K S
Sbjct: 415 FFKKVEEKNKKEKEDKFS 432
>At2g15270.1 68415.m01741 expressed protein
Length = 194
Score = 30.7 bits (66), Expect = 0.98
Identities = 25/98 (25%), Positives = 46/98 (46%)
Frame = +1
Query: 412 LEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNF 591
LEDE+ DLE ++R + ++ +V++ G +Y + Q + +
Sbjct: 46 LEDEE-DLEVKLRRI---LENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLTRMDI 101
Query: 592 RNQLKVVKKKEFTLEEEDKEKKPDWSKGSREIKR*KKK 705
+ K +K EFT+ E+K+K + + +KR KKK
Sbjct: 102 -DYNKRLKMAEFTIRREEKQKAAEEKTSKKRLKRQKKK 138
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 603
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 604 KVVKKKEFTLE-EEDKEKK 657
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +1
Query: 385 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 555
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 556 AKLQKKAAE-FNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGSREIKR*KK 702
+ +K AE +N L+ V + T E+ + R+I+ KK
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKK 197
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 352 DANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 528
+ NED +++ + E EDE + E ++ E + ++ N+ + K
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 529 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 657
+ K E + A Q+++ E N+ + +K+E + +EE KEK+
Sbjct: 543 ENEKIEKEEASSQEESKE----NETETKEKEESSSQEETKEKE 581
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 403 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 573
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 574 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 663
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 334 KPKNIDDANEDTIKRVCKDYHERIARLED 420
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 609
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 610 VKKKEFTLEEEDKEKK 657
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Frame = +1
Query: 523 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSK 672
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW++
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWNE 175
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 349 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 522
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 53 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 110
Query: 523 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 657
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 111 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 159
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 349 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 522
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 238
Query: 523 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 657
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 239 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 287
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 28.7 bits (61), Expect = 4.0
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 487 VNDLRGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVK--KKEFTLEEEDKEKK 657
V R K VK + + + E K +L+K A R +L+ K KKE LE D+E
Sbjct: 15 VRKARKKKVKGVVDPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDS 74
Query: 658 PDWSKGSRE 684
D +K +E
Sbjct: 75 ADAAKKKQE 83
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 287 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 448
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 344 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 463
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 609
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 610 VKKKEFTLEE 639
+ + TLE+
Sbjct: 1445 AQNRRLTLED 1454
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/110 (21%), Positives = 49/110 (44%)
Frame = +1
Query: 364 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKY 543
+T ++C+ Y E A + KFDL Y+V + I L + ++ +V+ + S
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVVLVR--SIDPLEIYLIEI--FWVRLSNNPYSLE 729
Query: 544 ENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGSREIKR 693
++ F + + N+ +L EF + E ++E W ++K+
Sbjct: 730 KHSFFEYETHFTVMNYGRKLNHKPTAEF-VREFEQEHNVKWMDIHEKVKQ 778
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 523 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 663
L+ V N K + KA+ N + + + LEEED+E++P+
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPE 331
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 373 KRVCKDYHERIARLEDEKFDLEYIVKR-KDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 549
K+ ++ +++ L+ L+ I+++ E+ + S ++LR K V L + E
Sbjct: 47 KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE-KHMET 105
Query: 550 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 669
K+ +L AA +++ + + + + ++ KP+WS
Sbjct: 106 KWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWS 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 445 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 582
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 442 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 618
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 619 KEFTLEEEDKE 651
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 442 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 618
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 619 KEFTLEEEDKE 651
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g65620.1 68418.m08255 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P27237
Oligopeptidase A (EC 3.4.24.70) {Salmonella
typhimurium}; contains Pfam profile PF01432: Peptidase
family M3
Length = 791
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 676 CPSTSQAFSLCLPLPR*IPSFSRPSIGY 593
CP S +FS CLP PR S S S +
Sbjct: 42 CPIWSSSFSFCLPPPRSTTSTSLSSSSF 69
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +1
Query: 430 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 609
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 610 VKKKEFTLEE 639
+ + TLE+
Sbjct: 1397 AQNRRLTLED 1406
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 441 HR*KERY-GDLRPELPSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREK 617
HR R+ + +P+L + QR+I++A+ + +++++IR E R+ + E R+K
Sbjct: 92 HRSSGRFVKNRKPDLEEMKRQREIKKAYKERVNELKEEIRSNKVEKRKKKE--EREKRKK 149
Query: 618 EGIHLGRGRQREK 656
E + L G + +K
Sbjct: 150 ENV-LRTGTKLQK 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,192,864
Number of Sequences: 28952
Number of extensions: 190925
Number of successful extensions: 850
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -