Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30629
         (833 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75544-4|CAA99880.1|  307|Caenorhabditis elegans Hypothetical pr...    72   6e-13
U39995-3|AAF99995.2|  572|Caenorhabditis elegans Hypothetical pr...    37   0.015
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr...    33   0.25 
Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    29   3.1  
U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical p...    29   4.1  
AF043700-4|AAO12406.1|  173|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U41542-4|AAK39154.1|  437|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U41542-3|AAK39156.1|  403|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z75544-4|CAA99880.1|  307|Caenorhabditis elegans Hypothetical
           protein K02A11.3 protein.
          Length = 307

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
 Frame = +3

Query: 270 TDDDLLRVSEEMFNADINNAF-NYIQVNLQGKTTPMSRNDEAQSNLLN-VPENVWSGPTI 443
           ++ +LL +++++   D N A  + I++N QG T     +D AQ+ L + V  +++  P+ 
Sbjct: 26  SNSELLAMAQKLRQVDTNRARPDQIKLNYQGHTVTRDDSDAAQAKLFSKVDTSLFRKPSY 85

Query: 444 RPFVALFDNYHKN--VIRPEFVTPNEETEQTTYINTILATGPIRSLITFLVNKGITQLNE 617
             ++ L DN+++   VI P      E+ E   +++ +L + P++ L  +   KG   +  
Sbjct: 86  ELYINLMDNFNRQTGVIEPRVSQAEEKNEVGKFLDYVLESRPMQELYNWFKAKG-HPIAT 144

Query: 618 YPEQVEL-LRKIWFTKYARHWTGLCKCSCAFENVFMAELKSNEGLGLHSWVVF 773
            P+     + ++WF+ Y+R   G    S  FE+VF+ E K+ E  G+H+WV F
Sbjct: 145 SPQVFRFWIGQLWFSHYSRA-LGRPDTS-GFEHVFIGEAKNGEISGMHNWVRF 195


>U39995-3|AAF99995.2|  572|Caenorhabditis elegans Hypothetical
           protein M60.2 protein.
          Length = 572

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 540 NTILATGPIRSLITFLVNKGITQLNEYPE-QVELLRKIWFTKYARHWTGLCKCSCAFENV 716
           NT  AT    S   +L +    + +     + ++L  +WF  Y R    L   S  +E+V
Sbjct: 399 NTFTATPMFASAFAYLQSINYKETSNLTNFKTKVLWPLWFGTYTRCKGPLG--SSGWEHV 456

Query: 717 FMAELKSNEGLGLHSWV 767
           F  E+KSNE  G H WV
Sbjct: 457 FSGEIKSNEVDGQHDWV 473



 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/80 (25%), Positives = 39/80 (48%)
 Frame = +3

Query: 534 YINTILATGPIRSLITFLVNKGITQLNEYPEQVELLRKIWFTKYARHWTGLCKCSCAFEN 713
           +++  +A+  ++   TFL  +G++  +    + +L   +WF  YAR+       SC F++
Sbjct: 115 FLDNFIASDAVKQAWTFLQAQGVSTSDPIDFRQQLYN-LWFLPYARNQA---LGSCGFKS 170

Query: 714 VFMAELKSNEGLGLHSWVVF 773
           VF+ E          +WV F
Sbjct: 171 VFVGEATGTVVNRFANWVGF 190


>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
           protein F46H5.4 protein.
          Length = 2018

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
 Frame = +3

Query: 234 YEDLLRQAQDSTTDDDLLRVSEEM--FNADIN-NAFNY-IQVNLQGKTTPMSRNDEAQSN 401
           +   +RQ  D T+D+D+ R+  EM   N  ++   FN+ +++ L G            + 
Sbjct: 505 FSSFIRQEGDKTSDEDIYRICSEMRRTNGKVHKKMFNFELELTLAGSNKSKEYQSHGSNL 564

Query: 402 LLNVPENVWSGPTIRPFVALFDNYHKNVI 488
            LN    +     I  + A  +  +KNVI
Sbjct: 565 TLNSERVIHEAMEIPIYQASLNKSYKNVI 593


>Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical
           protein C49F8.2 protein.
          Length = 771

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = +3

Query: 435 PTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPI------RSLITFLVNK 596
           PT    VALFDN H+    PE+   N       +++  LA  P       R  +   V+ 
Sbjct: 327 PTRSKSVALFDNKHQMSSIPEYSMLNTNLANLEHLDLELANSPCTTVRAQRRRVISKVSM 386

Query: 597 GITQLNEYPEQ 629
            + Q+NE  ++
Sbjct: 387 SVDQINELEDE 397


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 468 NYHKNVIRPEFVTPNEETEQTTYINTILATGPIRSLITFLVNKGITQLNEYP 623
           +Y  + + P F   +  T  T+Y+N I    P+   +  L + GITQL   P
Sbjct: 426 SYVPSAVPPMFSATSAPTPPTSYVNPIPPPAPLNFPMPSLSSIGITQLATPP 477


>U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical
           protein ZK1127.10 protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 453 VALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRSLIT-FLVNKGITQLN 614
           +  + N H +V+    +T N+E +Q  +    LA G + S    FLVN+G+  L+
Sbjct: 201 ITKYINGHSDVVMGAVITDNDEFQQHLFFMQ-LAVGAVPSPFDCFLVNRGLKTLH 254


>AF043700-4|AAO12406.1|  173|Caenorhabditis elegans Hypothetical
           protein K09H9.5 protein.
          Length = 173

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = -1

Query: 149 TSHMIADQVGKDVVEDLARSLGYVISV 69
           T H+ +D+ GK+ V+ + + +GY++ +
Sbjct: 140 TKHLTSDRCGKEAVDSMNKHMGYILGM 166


>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical protein
            ZK930.1 protein.
          Length = 1354

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 466  SNNATKGLIVGPLHTFSGTFNKFDCASSFLDI 371
            SNN  KG+I+  LH  SG   K  CA+   D+
Sbjct: 952  SNNNVKGIIITHLHEHSGKITKL-CANRESDL 982


>U41542-4|AAK39154.1|  437|Caenorhabditis elegans Hypothetical
           protein C07A12.7a protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -3

Query: 525 VPFLHSA*QTLV*SHSCDSCRIMQQKVLLLVRSIHSQERLINSIVLHHS 379
           VP   +A +  + S   D+CR MQQ+VL L+R + + E     ++++ S
Sbjct: 276 VPRKETADELQLLSDLNDTCRHMQQRVLDLIRYVSNDEVTYELLMVNDS 324


>U41542-3|AAK39156.1|  403|Caenorhabditis elegans Hypothetical
           protein C07A12.7b protein.
          Length = 403

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -3

Query: 525 VPFLHSA*QTLV*SHSCDSCRIMQQKVLLLVRSIHSQERLINSIVLHHS 379
           VP   +A +  + S   D+CR MQQ+VL L+R + + E     ++++ S
Sbjct: 242 VPRKETADELQLLSDLNDTCRHMQQRVLDLIRYVSNDEVTYELLMVNDS 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,639,847
Number of Sequences: 27780
Number of extensions: 388845
Number of successful extensions: 1064
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)