Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30628
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   1.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +1

Query: 133 VYKPGRYVADPGRYDPSR---DNSGRYIP 210
           +++  +Y  DP ++DP R   +N  + +P
Sbjct: 383 IHRDPQYFPDPEKFDPERFSDENKAKIVP 411


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 121 VSPFVYKPGRYVADPGRYDPSR 186
           +S   Y P  Y  DP +YDP R
Sbjct: 393 ISGLHYDP-EYYPDPEKYDPER 413



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 115 STVSPFVYKPGRYVADPGRYDP 180
           S V  FV+ P      P R+DP
Sbjct: 453 SVVKDFVFDPTERTPVPLRFDP 474


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 644 STNTLAPTVSPTE*TTLLTK 703
           S+  L PT S T  TTL TK
Sbjct: 157 SSTPLPPTTSTTTRTTLTTK 176


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 15  NGNACLFGNLPVSDSGAGRRNWKV 86
           +GN C  G  P ++  A  R W+V
Sbjct: 514 DGNDCSLGINPWANCTASTRCWEV 537


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,012
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)